RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 CLUL1Q15846 466 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 USP41Q3LFD5 358 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 CES5AQ6NT32 575 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 PDXDC1Q6P996 788 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 TAS1R3Q7RTX0 852 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 TMEM173Q86WV6 379 aaPredicted RBP15.09■□□□□ 0.01
VPS33B-206ENST00000557358 CEP57L1Q8IYX8 460 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 SCAND2PQ9GZW5 306 aaPredicted RBP15.09■□□□□ 0.01
VPS33B-206ENST00000557358 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.09■□□□□ 0.01
VPS33B-206ENST00000557358 PANK4Q9NVE7 773 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 DZANK1Q9NVP4 752 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 MYMKA6NI61 221 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 TNFRSF10AO00220 468 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 EDN1P05305 212 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 CLTAP09496 248 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 SSTR3P32745 418 aaPredicted RBP15.08■□□□□ 0
VPS33B-206ENST00000557358 GTF2BQ00403 316 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 MCL1Q07820 350 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 COASYQ13057 564 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 PKP1Q13835 747 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 LLGL2Q6P1M3 1020 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 FUT10Q6P4F1 479 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 SFR1Q86XK3 245 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 SYCP3Q8IZU3 236 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 GSTCDQ8NEC7 633 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.08■□□□□ 0
VPS33B-206ENST00000557358 CCDC34Q96HJ3 373 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 ACCSQ96QU6 501 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 TSPAN18Q96SJ8 248 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 MSTO1Q9BUK6 570 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 ST6GALNAC4Q9H4F1 302 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 RPF1Q9H9Y2 349 aaKnown RBP15.08■□□□□ 0
VPS33B-206ENST00000557358 PLEKHA5Q9HAU0 1116 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 PRKAG3Q9UGI9 489 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 RCOR1Q9UKL0 485 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 BARX2Q9UMQ3 279 aaPredicted RBP15.08■□□□□ 0
VPS33B-206ENST00000557358 PCDHA7Q9UN72 937 aa15.08■□□□□ 0
VPS33B-206ENST00000557358 TRIP11Q15643 1979 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 CUL9Q8IWT3 2517 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 SMIM28A0A1B0GU29 152 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 C2CD2LO14523 706 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 PTGESO14684 152 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 OGTO15294 1046 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 POLR2DO15514 142 aaKnown RBP15.07■□□□□ 0
VPS33B-206ENST00000557358 LINC01565O15544 149 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 CLASP2O75122 1294 aaKnown RBP15.07■□□□□ 0
VPS33B-206ENST00000557358 TBX10O75333 385 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 GCNT3O95395 438 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 PIGRP01833 764 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 NMT1P30419 496 aaKnown RBP15.07■□□□□ 0
VPS33B-206ENST00000557358 LTBRP36941 435 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 ASIC1P78348 528 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 PPP2R3AQ06190 1150 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 PTPN14Q15678 1187 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 GLRA4Q5JXX5 417 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 DCLRE1AQ6PJP8 1040 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 TMEM184AQ6ZMB5 413 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 ZNF720Q7Z2F6 126 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 MAP4K3Q8IVH8 894 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 CD302Q8IX05 232 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 GPR65Q8IYL9 337 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 LRRC15Q8TF66 581 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 BCL7CQ8WUZ0 217 aaPredicted RBP15.07■□□□□ 0
VPS33B-206ENST00000557358 ZBTB45Q96K62 511 aaPredicted RBP15.07■□□□□ 0
VPS33B-206ENST00000557358 SNX27Q96L92 541 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 OLFML3Q9NRN5 406 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 MARCH5Q9NX47 278 aa15.07■□□□□ 0
VPS33B-206ENST00000557358 MBTPS2O43462 519 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 B4GALT3O60512 393 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 B3GAT3O94766 335 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 KCNE1P15382 129 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 RPL9P32969 192 aaKnown RBP15.06■□□□□ 0
VPS33B-206ENST00000557358 DSG1Q02413 1049 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 ADALQ6DHV7 355 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 ANKRD54Q6NXT1 300 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 SHC4Q6S5L8 630 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 CEP120Q8N960 986 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 SMRP1Q8NCR6 262 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 AUTS2Q8WXX7 1259 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 PPP1R10Q96QC0 940 aaKnown RBP15.06■□□□□ 0
VPS33B-206ENST00000557358 TTPALQ9BTX7 342 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 TMEM206Q9H813 350 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 CNTN3Q9P232 1028 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 USP25Q9UHP3 1055 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 KCNH3Q9ULD8 1083 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 NUB1Q9Y5A7 615 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 HCFC2Q9Y5Z7 792 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 TTC28Q96AY4 2481 aa15.06■□□□□ 0
VPS33B-206ENST00000557358 REV3LO60673 3130 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 GOLGA6L4A6NEF3 574 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 GLUD1P00367 558 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 IL9P15248 144 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 ITIH3Q06033 890 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 DLX2Q07687 328 aaPredicted RBP15.05■□□□□ -0
VPS33B-206ENST00000557358 SMAD2Q15796 467 aaKnown RBP15.05■□□□□ -0
VPS33B-206ENST00000557358 AXDND1Q5T1B0 1012 aaPredicted RBP15.05■□□□□ -0
VPS33B-206ENST00000557358 FAM171A1Q5VUB5 890 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 RESP18Q5W5W9 173 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 CEP57Q86XR8 500 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 RIN2Q8WYP3 895 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms