RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 NT5C3AQ9H0P0 336 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 FNIP2Q9P278 1114 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 EPS15L1Q9UBC2 864 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 ADAM28Q9UKQ2 775 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 DUSP12Q9UNI6 340 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 CLUHO75153 1309 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 KRBA1A5PL33 1030 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 ADAM12O43184 909 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 GFRA3O60609 400 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 CYP11B2P19099 503 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 AOC1P19801 751 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 RPA1P27694 616 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 ZNF174Q15697 407 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 USP41Q3LFD5 358 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 CD300LGQ6UXG3 332 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 SPNS2Q8IVW8 549 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 SLC44A3Q8N4M1 653 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 PRIMPOLQ96LW4 560 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 NACC1Q96RE7 527 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 EPAS1Q99814 870 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 CLSTN3Q9BQT9 956 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 TRIM6Q9C030 488 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 PLEKHA4Q9H4M7 779 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 PRMT7Q9NVM4 692 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 SNTG2Q9NY99 539 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 IGSF9Q9P2J2 1179 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 PARP2Q9UGN5 583 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 SSX2IPQ9Y2D8 614 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 DOCK6Q96HP0 2047 aa12.35□□□□□ -0.43
HNRNPC-231ENST00000557336 CASTOR2A6NHX0 329 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 KIF4AO95239 1232 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 NBL1P41271 181 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 TUSC3Q13454 348 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 HSP90AA2PQ14568 343 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 NT5DC1Q5TFE4 455 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 PADI6Q6TGC4 694 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 NOSTRINQ8IVI9 506 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 GLYCTKQ8IVS8 523 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 SIX5Q8N196 739 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 MCPH1Q8NEM0 835 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 FLCNQ8NFG4 579 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 ST13P5Q8NFI4 369 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 LNX1Q8TBB1 728 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 HASPINQ8TF76 798 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 KIF2CQ99661 725 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 KIFC3Q9BVG8 833 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 PRKD2Q9BZL6 878 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
HNRNPC-231ENST00000557336 TDRD15B5MCY1 1934 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 GPR179Q6PRD1 2367 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 ANHXE9PGG2 379 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 ACKR2O00590 384 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 NR1I2O75469 434 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 TADA2AO75478 443 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 ZMYND10O75800 440 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 RECQL4O94761 1208 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 LAMP2P13473 410 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 NTHL1P78549 312 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 TRIM29Q14134 588 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 RSPO2Q6UXX9 243 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 CCDC83Q8IWF9 413 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 HACE1Q8IYU2 909 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 FBXO18Q8NFZ0 1043 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 PIK3R5Q8WYR1 880 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 RPP25Q9BUL9 199 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 ZDHHC7Q9NXF8 308 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 FBXW11Q9UKB1 542 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 CACNA1AO00555 2505 aa12.33□□□□□ -0.44
HNRNPC-231ENST00000557336 DNAH14Q0VDD8 3507 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 PRR23AA6NEV1 266 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 MEFVO15553 781 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 PRKCBP05771 671 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 CFHP08603 1231 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 GBP2P32456 591 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 NAMPTP43490 491 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 PRPF4BQ13523 1007 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 HTR4Q13639 388 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 IL17AQ16552 155 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 FAM171A1Q5VUB5 890 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 FRMD5Q7Z6J6 570 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 CCDC105Q8IYK2 499 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 DAW1Q8N136 415 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 CCDC43Q96MW1 224 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 FOXP1Q9H334 677 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 MFSD1Q9H3U5 465 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 WNT16Q9UBV4 365 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 DPP7Q9UHL4 492 aa12.32□□□□□ -0.44
HNRNPC-231ENST00000557336 SF3B1O75533 1304 aaKnown RBP eCLIP12.32□□□□□ -0.445e-6■■■■■ 78.7
HNRNPC-231ENST00000557336 MTCL1Q9Y4B5 1905 aaKnown RBP12.31□□□□□ -0.44
HNRNPC-231ENST00000557336 N4BP3O15049 544 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms