RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PCDHA4Q9UN74 947 aa13.96□□□□□ -0.17
PSEN1-221ENST00000557293 F5P12259 2224 aa13.96□□□□□ -0.17
PSEN1-221ENST00000557293 SF3B1O75533 1304 aaKnown RBP eCLIP13.95□□□□□ -0.186e-7■■■■■ 93.2
PSEN1-221ENST00000557293 INO80B-WBP1J3KQ70 363 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 TM4SF5O14894 197 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 LRP3O75074 770 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 XYLBO75191 536 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 NPTXRO95502 500 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 YWHABP31946 246 aaKnown RBP13.95□□□□□ -0.18
PSEN1-221ENST00000557293 OR1D2P34982 312 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 ARL2P36404 184 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 AKAP17AQ02040 695 aaKnown RBP13.95□□□□□ -0.18
PSEN1-221ENST00000557293 SPIRE1Q08AE8 756 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 TUSC3Q13454 348 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 CAPSQ13938 189 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 GAS6Q14393 721 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 PABPC1LQ4VXU2 614 aaKnown RBP13.95□□□□□ -0.18
PSEN1-221ENST00000557293 XKR9Q5GH70 373 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 CD300LGQ6UXG3 332 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 CEP57Q86XR8 500 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 BLIDQ8IZY5 108 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 DYDC2Q96IM9 177 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 C22orf23Q9BZE7 217 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 NCOA5Q9HCD5 579 aaKnown RBP13.95□□□□□ -0.18
PSEN1-221ENST00000557293 AVENQ9NQS1 362 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-221ENST00000557293 PARP2Q9UGN5 583 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 DDX25Q9UHL0 483 aaKnown RBP13.95□□□□□ -0.18
PSEN1-221ENST00000557293 MRPS17Q9Y2R5 130 aaKnown RBP13.95□□□□□ -0.18
PSEN1-221ENST00000557293 ZMYM2Q9UBW7 1377 aa13.95□□□□□ -0.18
PSEN1-221ENST00000557293 VWA8A3KMH1 1905 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 CASTOR2A6NHX0 329 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 DKC1O60832 514 aaKnown RBP eCLIP13.94□□□□□ -0.18
PSEN1-221ENST00000557293 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
PSEN1-221ENST00000557293 PMLP29590 882 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 PDIA3P30101 505 aaKnown RBP13.94□□□□□ -0.18
PSEN1-221ENST00000557293 NRLP54845 237 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 EVCP57679 992 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 DMWDQ09019 674 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 KRT32Q14532 448 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 MXD4Q14582 209 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-221ENST00000557293 CSRP2Q16527 193 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 INF2Q27J81 1249 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 SLC27A1Q6PCB7 646 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 DAGLBQ8NCG7 672 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 ELSPBP1Q96BH3 223 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 FAM20AQ96MK3 541 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 MTRQ99707 1265 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 LXNQ9BS40 222 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 LMAN1LQ9HAT1 526 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 GDE1Q9NZC3 331 aa13.94□□□□□ -0.18
PSEN1-221ENST00000557293 NDRG2Q9UN36 371 aaKnown RBP13.94□□□□□ -0.18
PSEN1-221ENST00000557293 MRPS23Q9Y3D9 190 aaKnown RBP13.94□□□□□ -0.18
PSEN1-221ENST00000557293 SLITRK3O94933 977 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 RHOP08100 348 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 CEBPBP17676 345 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 FGFR3P22607 806 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 GLRA2P23416 452 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 CCT2P78371 535 aaKnown RBP13.93□□□□□ -0.18
PSEN1-221ENST00000557293 SATB1Q01826 763 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 NCBP1Q09161 790 aaKnown RBP13.93□□□□□ -0.18
PSEN1-221ENST00000557293 SRSF5Q13243 272 aaKnown RBP13.93□□□□□ -0.18
PSEN1-221ENST00000557293 CTTNQ14247 550 aaKnown RBP13.93□□□□□ -0.18
PSEN1-221ENST00000557293 PRSS36Q5K4E3 855 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 N4BP2L1Q5TBK1 243 aaPredicted RBP13.93□□□□□ -0.18
PSEN1-221ENST00000557293 PRR23CQ6ZRP0 262 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 RTL10Q7L3V2 364 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 OTUD6AQ7L8S5 288 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 MAP4K3Q8IVH8 894 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 DNASE1L2Q92874 299 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 TCEAL4Q96EI5 215 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 AIFM3Q96NN9 605 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 NFKBIZQ9BYH8 718 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 MTRRQ9UBK8 725 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 COL4A2P08572 1712 aa13.93□□□□□ -0.18
PSEN1-221ENST00000557293 MAN2B1O00754 1011 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 CHRNB1P11230 501 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 HOXC13P31276 330 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 FGD1P98174 961 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 GRM2Q14416 872 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 WDR44Q5JSH3 913 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 FAM78AQ5JUQ0 283 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 TRIM6Q9C030 488 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-221ENST00000557293 SLKQ9H2G2 1235 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-221ENST00000557293 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 ZNF334Q9HCZ1 680 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-221ENST00000557293 TRPV5Q9NQA5 729 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 RAB23Q9ULC3 237 aa13.92□□□□□ -0.18
PSEN1-221ENST00000557293 ARHGEF37A1IGU5 675 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 CHURC1-FNTBB4DL54 471 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 K7ESF4 209 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 MOSPD3O75425 235 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 PTPN2P17706 415 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 CCR2P41597 374 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 CXCL12P48061 93 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 FNTBP49356 437 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 TFDP1Q14186 410 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 SIM2Q14190 667 aaPredicted RBP13.91□□□□□ -0.18
PSEN1-221ENST00000557293 PPP4R3AQ6IN85 833 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms