RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 NBPF12Q5TAG4 269 aaPredicted RBP24.23■■□□□ 1.47
RCCD1-208ENST00000557266 SNRNP48Q6IEG0 339 aaKnown RBP24.23■■□□□ 1.47
RCCD1-208ENST00000557266 USP37Q86T82 979 aa24.23■■□□□ 1.47
RCCD1-208ENST00000557266 TLCD1Q96CP7 247 aa24.23■■□□□ 1.47
RCCD1-208ENST00000557266 FAM213AQ9BRX8 229 aa24.23■■□□□ 1.47
RCCD1-208ENST00000557266 PODXLO00592 558 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 DGAT1O75907 488 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 RARAP10276 462 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 GARTP22102 1010 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 BRDTQ58F21 947 aaPredicted RBP24.22■■□□□ 1.47
RCCD1-208ENST00000557266 CCDC60Q8IWA6 550 aaPredicted RBP24.22■■□□□ 1.47
RCCD1-208ENST00000557266 RNF25Q96BH1 459 aaPredicted RBP24.22■■□□□ 1.47
RCCD1-208ENST00000557266 CPP00450 1065 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 COILP38432 576 aaPredicted RBP24.22■■□□□ 1.47
RCCD1-208ENST00000557266 RTP1P59025 263 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 SP4Q02446 784 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 GCNT1Q02742 428 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 PACS2Q86VP3 889 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 MCPH1Q8NEM0 835 aa24.22■■□□□ 1.47
RCCD1-208ENST00000557266 PSPC1Q8WXF1 523 aaKnown RBP24.22■■□□□ 1.47
RCCD1-208ENST00000557266 JPH1Q9HDC5 661 aaPredicted RBP24.22■■□□□ 1.47
RCCD1-208ENST00000557266 ZNFX1Q9P2E3 1918 aaKnown RBP24.21■■□□□ 1.47
RCCD1-208ENST00000557266 CAND2O75155 1236 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 PSAPP07602 524 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 KRT5P13647 590 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 RWDD2BP57060 319 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 PRKCEQ02156 737 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 SAMD7Q7Z3H4 446 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 SPATS2Q86XZ4 545 aaKnown RBP24.21■■□□□ 1.47
RCCD1-208ENST00000557266 NSUN6Q8TEA1 469 aaKnown RBP24.21■■□□□ 1.47
RCCD1-208ENST00000557266 CYP26B1Q9NR63 512 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 ARHGAP28Q9P2N2 729 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 SEPT9Q9UHD8 586 aaPredicted RBP24.21■■□□□ 1.47
RCCD1-208ENST00000557266 HACL1Q9UJ83 578 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 MTUS1Q9ULD2 1270 aa24.21■■□□□ 1.47
RCCD1-208ENST00000557266 TRAPPC3O43617 180 aa24.2■■□□□ 1.47
RCCD1-208ENST00000557266 GBP1P32455 592 aa24.2■■□□□ 1.47
RCCD1-208ENST00000557266 LIG3P49916 1009 aa24.2■■□□□ 1.47
RCCD1-208ENST00000557266 ENPEPQ07075 957 aa24.2■■□□□ 1.47
RCCD1-208ENST00000557266 C15orf39Q6ZRI6 1047 aa24.2■■□□□ 1.47
RCCD1-208ENST00000557266 ZNF516Q92618 1163 aa24.2■■□□□ 1.47
RCCD1-208ENST00000557266 BICD1Q96G01 975 aa24.2■■□□□ 1.47
RCCD1-208ENST00000557266 ZNF214Q9UL59 606 aaPredicted RBP24.2■■□□□ 1.47
RCCD1-208ENST00000557266 ARID2Q68CP9 1835 aa24.2■■□□□ 1.46
RCCD1-208ENST00000557266 PAEPP09466 180 aa24.2■■□□□ 1.46
RCCD1-208ENST00000557266 UBAP2Q5T6F2 1119 aaKnown RBP24.2■■□□□ 1.46
RCCD1-208ENST00000557266 DENND2CQ68D51 928 aa24.2■■□□□ 1.46
RCCD1-208ENST00000557266 ENOSF1Q7L5Y1 443 aa24.2■■□□□ 1.46
RCCD1-208ENST00000557266 HOOK3Q86VS8 718 aa24.2■■□□□ 1.46
RCCD1-208ENST00000557266 CCDC105Q8IYK2 499 aa24.2■■□□□ 1.46
RCCD1-208ENST00000557266 SCYL3Q8IZE3 742 aa24.2■■□□□ 1.46
RCCD1-208ENST00000557266 C12orf50Q8NA57 414 aaPredicted RBP24.2■■□□□ 1.46
RCCD1-208ENST00000557266 POLR3FQ9H1D9 316 aaPredicted RBP24.2■■□□□ 1.46
RCCD1-208ENST00000557266 ATP6V0A4Q9HBG4 840 aa24.2■■□□□ 1.46
RCCD1-208ENST00000557266 SORBS3O60504 671 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 DKC1O60832 514 aaKnown RBP eCLIP24.19■■□□□ 1.46
RCCD1-208ENST00000557266 KCNJ1P48048 391 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 ACTR2P61160 394 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 MICALL2Q8IY33 904 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 ZKSCAN4Q969J2 545 aaPredicted RBP24.19■■□□□ 1.46
RCCD1-208ENST00000557266 SLC9A2Q9UBY0 812 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 PTPN22Q9Y2R2 807 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 NFASCO94856 1347 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 DICER1Q9UPY3 1922 aaKnown RBP24.19■■□□□ 1.46
RCCD1-208ENST00000557266 GMNCA6NCL1 334 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 ZC3H11AO75152 810 aaKnown RBP eCLIP24.19■■□□□ 1.46
RCCD1-208ENST00000557266 UNGP13051 313 aaPredicted RBP24.19■■□□□ 1.46
RCCD1-208ENST00000557266 FNTAP49354 379 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 TTC31Q49AM3 519 aaPredicted RBP24.19■■□□□ 1.46
RCCD1-208ENST00000557266 LMBRD2Q68DH5 695 aaPredicted RBP24.19■■□□□ 1.46
RCCD1-208ENST00000557266 ABHD15Q6UXT9 468 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 MICALL1Q8N3F8 863 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 ZNF280CQ8ND82 737 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 CYFIP2Q96F07 1278 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 TRIM7Q9C029 511 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 PARP2Q9UGN5 583 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 WDR81Q562E7 1941 aa24.19■■□□□ 1.46
RCCD1-208ENST00000557266 RLFQ13129 1914 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 CLDN3O15551 220 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 MEFVO15553 781 aaPredicted RBP24.18■■□□□ 1.46
RCCD1-208ENST00000557266 PTPRAP18433 802 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 RPS12P25398 132 aaKnown RBP24.18■■□□□ 1.46
RCCD1-208ENST00000557266 OAZ1P54368 228 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 TMEM132BQ14DG7 1078 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 IFT74Q96LB3 600 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 RUNDC3BQ96NL0 473 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 SEMA4AQ9H3S1 761 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 C1orf112Q9NSG2 853 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 CYP39A1Q9NYL5 469 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 ANAPC7Q9UJX3 599 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 ADAMTS5Q9UNA0 930 aa24.18■■□□□ 1.46
RCCD1-208ENST00000557266 DSG3P32926 999 aa24.17■■□□□ 1.46
RCCD1-208ENST00000557266 HMGCS2P54868 508 aa24.17■■□□□ 1.46
RCCD1-208ENST00000557266 WNT7BP56706 349 aa24.17■■□□□ 1.46
RCCD1-208ENST00000557266 CLDN10P78369 228 aa24.17■■□□□ 1.46
RCCD1-208ENST00000557266 DOCK1Q14185 1865 aa24.17■■□□□ 1.46
RCCD1-208ENST00000557266 SLC29A2Q14542 456 aa24.17■■□□□ 1.46
RCCD1-208ENST00000557266 RAPGEF5Q92565 580 aa24.17■■□□□ 1.46
RCCD1-208ENST00000557266 ART4Q93070 314 aa24.17■■□□□ 1.46
RCCD1-208ENST00000557266 LRRC19Q9H756 370 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms