RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 TBCBQ99426 244 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 SEC62Q99442 399 aaKnown RBP6.92□□□□□ -1.3
FOXN3-215ENST00000557261 BOCQ9BWV1 1114 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 QRSL1Q9H0R6 528 aaKnown RBP6.92□□□□□ -1.3
FOXN3-215ENST00000557261 PRDM12Q9H4Q4 367 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 CD209Q9NNX6 404 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 C1GALT1Q9NS00 363 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 DNAJC28Q9NX36 388 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 POLHQ9Y253 713 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 PPP2R3BQ9Y5P8 575 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 RPS6KL1Q9Y6S9 549 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 ROBO3Q96MS0 1386 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 MYH1P12882 1939 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 MYH8P13535 1937 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 DICER1Q9UPY3 1922 aaKnown RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 NPHP3-ACAD11A0A0J9YXS1 232 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 SLC12A8A0AV02 714 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 F5H423 210 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 CASTP20810 708 aaKnown RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 AK2P54819 239 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 TNK2Q07912 1038 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 IFI16Q16666 785 aaKnown RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 ATAT1Q5SQI0 421 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 NAA16Q6N069 864 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 BLOC1S2Q6QNY1 142 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 DPP8Q6V1X1 898 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 DNAJC5GQ8N7S2 189 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 PPM1NQ8N819 430 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 SH3RF2Q8TEC5 729 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 TNIP3Q96KP6 325 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 ZSCAN31Q96LW9 406 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 JAKMIP1Q96N16 626 aaKnown RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 NEK1Q96PY6 1258 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 RIOK1Q9BRS2 568 aaKnown RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 DUSP23Q9BVJ7 150 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 NACAP1Q9BZK3 213 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 BHMT2Q9H2M3 363 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 AP5S1Q9NUS5 200 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 CLDND1Q9NY35 253 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 POLLQ9UGP5 575 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 ANAPC4Q9UJX5 808 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 FBXO9Q9UK97 447 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 GAKO14976 1311 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 NID2Q14112 1375 aa6.91□□□□□ -1.3
FOXN3-215ENST00000557261 COL2A1P02458 1487 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-215ENST00000557261 NKRFO15226 690 aaKnown RBP eCLIP6.9□□□□□ -1.3
FOXN3-215ENST00000557261 FKTNO75072 461 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 FRAT2O75474 233 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-215ENST00000557261 ZNF205O95201 554 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 MBD4O95243 580 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 LDHCP07864 332 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 SYPP08247 313 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 POU2F2P09086 479 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 SETSIPP0DME0 302 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 AGXTP21549 392 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 POLD1P28340 1107 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 TPP2P29144 1249 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-215ENST00000557261 LSP1P33241 339 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 BMP8BP34820 402 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 PPM1FP49593 454 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-215ENST00000557261 MMP14P50281 582 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 KIF11P52732 1056 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 RCAN1P53805 252 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 EVCP57679 992 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 PHC1P78364 1004 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 LAPTM5Q13571 262 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 TRIM14Q14142 442 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 CRY1Q16526 586 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 ARHGAP44Q17R89 818 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 CT83Q5H943 113 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 ARHGAP36Q6ZRI8 547 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 CCDC129Q6ZRS4 1044 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 CCDC149Q6ZUS6 474 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 TXNRD3Q86VQ6 643 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 NOSTRINQ8IVI9 506 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 RTKN2Q8IZC4 609 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 CPXCR1Q8N123 301 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 FAM43AQ8N2R8 423 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 PAF1Q8N7H5 531 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 ZNF610Q8N9Z0 462 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 NLGN2Q8NFZ4 835 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 TRMT2BQ96GJ1 504 aaKnown RBP6.9□□□□□ -1.3
FOXN3-215ENST00000557261 TMX3Q96JJ7 454 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 HEXIM2Q96MH2 286 aaKnown RBP6.9□□□□□ -1.3
FOXN3-215ENST00000557261 MMP19Q99542 508 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 MRIQ9BWK5 157 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 ANO3Q9BYT9 981 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 RNF41Q9H4P4 317 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-215ENST00000557261 SP110Q9HB58 689 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 ATP8A2Q9NTI2 1148 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 SAGE1Q9NXZ1 904 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 CHMP5Q9NZZ3 219 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 LIMCH1Q9UPQ0 1083 aa6.9□□□□□ -1.3
FOXN3-215ENST00000557261 GREB1LQ9C091 1923 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 MYH15Q9Y2K3 1946 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 E7EWF7 191 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 MAN2B1O00754 1011 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 SCDO00767 359 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ZNF213O14771 459 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms