RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 RBPJLQ9UBG7 517 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 DDX41Q9UJV9 622 aaKnown RBP5.11□□□□□ -1.59
SRP54-212ENST00000556992 CROTQ9UKG9 612 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 WASF3Q9UPY6 502 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 EMC9Q9Y3B6 208 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 NEDD4P46934 1319 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 RREB1Q92766 1687 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 MROH7-TTC4A0A0A0MT08 1334 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 SYCE3A1L190 88 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 ARNTLO00327 626 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 CTAGE5O15320 804 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 PRPF3O43395 683 aaKnown RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 TBX1O43435 398 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 DTNBO60941 627 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 DDAH1O94760 285 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 TNKSO95271 1327 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 DEXIO95424 95 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 CAVIN2O95810 425 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 ZNF16P17020 682 aaPredicted RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 U2AF2P26368 475 aaKnown RBP eCLIP5.1□□□□□ -1.593e-75■■■■■ 160.4
SRP54-212ENST00000556992 BCL6P41182 706 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 BTDP43251 543 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 GIPRP48546 466 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 GNAQP50148 359 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 FKBP1AP62942 108 aaKnown RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 HDLBPQ00341 1268 aaKnown RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 TFAP4Q01664 338 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 GNL2Q13823 731 aaKnown RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 SEC23AQ15436 765 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 NTRK3Q16288 839 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 SPDYAQ5MJ70 313 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 KRT40Q6A162 431 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 GTF2IRD2BQ6EKJ0 949 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 FAM173BQ6P4H8 233 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 VHLLQ6RSH7 139 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 CEP68Q76N32 757 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 GTF2IRD2Q86UP8 949 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 MICU3Q86XE3 530 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 CCDC103Q8IW40 242 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 TEX11Q8IYF3 940 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 ZNF654Q8IZM8 581 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 ENAHQ8N8S7 591 aaPredicted RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 JMYQ8N9B5 988 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 ARRDC4Q8NCT1 418 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 KCNG4Q8TDN1 519 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 DOT1LQ8TEK3 1739 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 FRS2Q8WU20 508 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 NUP133Q8WUM0 1156 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 ZCCHC14Q8WYQ9 949 aaKnown RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 WWC2-AS2Q96NR7 200 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 LZTS2Q9BRK4 669 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 SLC26A6Q9BXS9 759 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 RTFDC1Q9BY42 306 aaPredicted RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 PDGFDQ9GZP0 370 aaPredicted RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 DEF6Q9H4E7 631 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 L2HGDHQ9H9P8 463 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 JADE2Q9NQC1 790 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 STK36Q9NRP7 1315 aa5.1□□□□□ -1.59
SRP54-212ENST00000556992 DDX19AQ9NUU7 478 aaKnown RBP5.1□□□□□ -1.59
SRP54-212ENST00000556992 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.1□□□□□ -1.59
SRP54-212ENST00000556992 GAKO14976 1311 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 CYP2D7A0A087X1C5 515 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 TSPY2A6NKD2 308 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 B4GALT4O60513 344 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 PRDM1O75626 825 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 YEATS4O95619 227 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 ME1P48163 572 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 NASPP49321 788 aaPredicted RBP5.09□□□□□ -1.59
SRP54-212ENST00000556992 GUCY1B3Q02153 619 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 KIF23Q02241 960 aaPredicted RBP5.09□□□□□ -1.59
SRP54-212ENST00000556992 KRTAP1-1Q07627 177 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 TROAPQ12815 778 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 SLC39A14Q15043 492 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 STK38Q15208 465 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 STRIP1Q5VSL9 837 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 ADALQ6DHV7 355 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 TMC5Q6UXY8 1006 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 CIR1Q86X95 450 aaPredicted RBP5.09□□□□□ -1.59
SRP54-212ENST00000556992 RAB11FIP4Q86YS3 637 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 KBTBD2Q8IY47 623 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 RTKN2Q8IZC4 609 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 FAM177A1Q8N128 213 aaPredicted RBP5.09□□□□□ -1.59
SRP54-212ENST00000556992 CTCFLQ8NI51 663 aaPredicted RBP5.09□□□□□ -1.59
SRP54-212ENST00000556992 BICD2Q8TD16 824 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 TGFBRAP1Q8WUH2 860 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 PHKBQ93100 1093 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 TEKT1Q969V4 418 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 GPR101Q96P66 508 aaPredicted RBP5.09□□□□□ -1.59
SRP54-212ENST00000556992 RNF26Q9BY78 433 aaPredicted RBP5.09□□□□□ -1.59
SRP54-212ENST00000556992 VPS33BQ9H267 617 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 FOXP1Q9H334 677 aaPredicted RBP5.09□□□□□ -1.59
SRP54-212ENST00000556992 KAT14Q9H8E8 782 aa5.09□□□□□ -1.59
SRP54-212ENST00000556992 ITGB4P16144 1822 aa5.09□□□□□ -1.6
SRP54-212ENST00000556992 VIRMAQ69YN4 1812 aaKnown RBP5.09□□□□□ -1.6
SRP54-212ENST00000556992 SPEF2Q9C093 1822 aa5.09□□□□□ -1.6
SRP54-212ENST00000556992 NID2Q14112 1375 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 ANKRD34BA5PLL1 514 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 CYR61O00622 381 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 SPTLC2O15270 562 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms