RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 ELAVL2Q12926 359 aaKnown RBP24.86■■□□□ 1.57
TMEM260-214ENST00000556975 PTPAQ15257 358 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 ZNF568Q3ZCX4 644 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 MPZL3Q6UWV2 235 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 CEP120Q8N960 986 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 LRRC15Q8TF66 581 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 RIN2Q8WYP3 895 aaPredicted RBP24.86■■□□□ 1.57
TMEM260-214ENST00000556975 B3GALT6Q96L58 329 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 CCSER1Q9C0I3 900 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 TOPORSQ9NS56 1045 aaPredicted RBP24.86■■□□□ 1.57
TMEM260-214ENST00000556975 BLOC1S4Q9NUP1 217 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 ODF2LQ9ULJ1 636 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 SMIM28A0A1B0GU29 152 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 TMEM189-UBE2V1I3L0A0 370 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 YARSP54577 528 aaKnown RBP24.85■■□□□ 1.57
TMEM260-214ENST00000556975 STRN3Q13033 797 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 RESTQ13127 1097 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 LILRA6Q6PI73 481 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 ELMSAN1Q6PJG2 1045 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 CYP26C1Q6V0L0 522 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 BMP8AQ7Z5Y6 402 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 TTPALQ9BTX7 342 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 PLEKHA4Q9H4M7 779 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 MAN1C1Q9NR34 630 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 CLIC4Q9Y696 253 aa24.85■■□□□ 1.57
TMEM260-214ENST00000556975 PLXNA3P51805 1871 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 NPHP3-ACAD11A0A0J9YXS1 232 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 C2CD4DB7Z1M9 353 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 H0YCG3 227 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 TOM1L1O75674 476 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 NCKAP1LP55160 1127 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 PTPN21Q16825 1174 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 RTP2Q5QGT7 225 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 DCLRE1AQ6PJP8 1040 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 ZPBP2Q6X784 338 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 TRIM67Q6ZTA4 783 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 ZDHHC14Q8IZN3 488 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 FEZF2Q8TBJ5 459 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 PIK3R5Q8WYR1 880 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 UROC1Q96N76 676 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 ACAP3Q96P50 834 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 TCHPQ9BT92 498 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 TSHZ2Q9NRE2 1034 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 ZNF318Q5VUA4 2279 aa24.84■■□□□ 1.57
TMEM260-214ENST00000556975 MTCL1Q9Y4B5 1905 aaKnown RBP24.84■■□□□ 1.57
TMEM260-214ENST00000556975 SPDYE4A6NLX3 237 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 K7ELQ4 463 aaPredicted RBP24.83■■□□□ 1.57
TMEM260-214ENST00000556975 PLCG1P19174 1290 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 SCP2P22307 547 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 KARSQ15046 597 aaKnown RBP24.83■■□□□ 1.57
TMEM260-214ENST00000556975 GLRA4Q5JXX5 417 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 FAM171A1Q5VUB5 890 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 ZBTB33Q86T24 672 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 PLCD3Q8N3E9 789 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 HASPINQ8TF76 798 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 RAD54LQ92698 747 aa24.83■■□□□ 1.57
TMEM260-214ENST00000556975 ZBTB45Q96K62 511 aaPredicted RBP24.83■■□□□ 1.57
TMEM260-214ENST00000556975 TGM5O43548 720 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 KCNE1P15382 129 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 SP100P23497 879 aaPredicted RBP24.82■■□□□ 1.56
TMEM260-214ENST00000556975 ZNF131P52739 623 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 OSTNP61366 133 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 CACNB1Q02641 598 aaPredicted RBP24.82■■□□□ 1.56
TMEM260-214ENST00000556975 UPP1Q16831 310 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 CD300LGQ6UXG3 332 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 HFE2Q6ZVN8 426 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 DENND4AQ7Z401 1863 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 GPBP1Q86WP2 473 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 PALB2Q86YC2 1186 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 LNX1Q8TBB1 728 aaPredicted RBP24.82■■□□□ 1.56
TMEM260-214ENST00000556975 SNX27Q96L92 541 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 REEP2Q9BRK0 252 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 MTMR6Q9Y217 621 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 SRPRBQ9Y5M8 271 aaKnown RBP24.82■■□□□ 1.56
TMEM260-214ENST00000556975 MORC2Q9Y6X9 1032 aaPredicted RBP24.82■■□□□ 1.56
TMEM260-214ENST00000556975 MYO10Q9HD67 2058 aa24.82■■□□□ 1.56
TMEM260-214ENST00000556975 CCDC195A0A1B0GUA6 201 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 B3GAT3O94766 335 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 DDIT3P35638 169 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 CLCNKBP51801 687 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 SIGLEC14Q08ET2 396 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 MCM6Q14566 821 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 PDXDC1Q6P996 788 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 PRSS55Q6UWB4 352 aaPredicted RBP24.81■■□□□ 1.56
TMEM260-214ENST00000556975 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.81■■□□□ 1.56
TMEM260-214ENST00000556975 HAUS6Q7Z4H7 955 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 TDRD5Q8NAT2 981 aaKnown RBP24.81■■□□□ 1.56
TMEM260-214ENST00000556975 DDX27Q96GQ7 796 aaKnown RBP24.81■■□□□ 1.56
TMEM260-214ENST00000556975 SLC38A7Q9NVC3 462 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 CNTN3Q9P232 1028 aa24.81■■□□□ 1.56
TMEM260-214ENST00000556975 FBXO2Q9UK22 296 aaPredicted RBP24.81■■□□□ 1.56
TMEM260-214ENST00000556975 C2orf16Q68DN1 1984 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 ZDBF2Q9HCK1 2354 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 CITO14578 2027 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 TMEM221A6NGB7 291 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 M0R296 226 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 RPL17P18621 184 aaKnown RBP24.8■■□□□ 1.56
TMEM260-214ENST00000556975 FGFR3P22607 806 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 MCL1Q07820 350 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 DHX8Q14562 1220 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms