RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CXCL14O95715 111 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 CLTAP09496 248 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 CTSAP10619 480 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 KCNE1P15382 129 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 CASP5P51878 434 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 MRPS5P82675 430 aaKnown RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 POU5F1Q01860 360 aaKnown RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 HYAL1Q12794 435 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 PSMD2Q13200 908 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 CUL4BQ13620 913 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 SMC1AQ14683 1233 aaKnown RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 COL19A1Q14993 1142 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 AAK1Q2M2I8 961 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 SLC10A6Q3KNW5 377 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 SEZ6Q53EL9 994 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 SLC39A4Q6P5W5 647 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 SYCP3Q8IZU3 236 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 FSIP1Q8NA03 581 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 ZNF507Q8TCN5 953 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 BCL7CQ8WUZ0 217 aaPredicted RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 PABPC5Q96DU9 382 aaKnown RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 CCDC34Q96HJ3 373 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 SNX27Q96L92 541 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 UROC1Q96N76 676 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 PPP1R10Q96QC0 940 aaKnown RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 TSPAN18Q96SJ8 248 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 CDCA3Q99618 268 aaPredicted RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 MSTO1Q9BUK6 570 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 IGFLR1Q9H665 355 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 TLE6Q9H808 572 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 PRDM6Q9NQX0 595 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 SLC38A7Q9NVC3 462 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 CHMP5Q9NZZ3 219 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 CNTN3Q9P232 1028 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 AGO2Q9UKV8 859 aaKnown RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 SSX2IPQ9Y2D8 614 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 PRG3Q9Y2Y8 225 aaPredicted RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.66□□□□□ -0.54
LINC00239-201ENST00000556973 IRAK3Q9Y616 596 aa11.66□□□□□ -0.54
LINC00239-201ENST00000556973 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 EIF3DO15371 548 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 FAM189A1O60320 539 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 PRPF6O94906 941 aaKnown RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 CSPG5O95196 566 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 EFEMP2O95967 443 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 LDHAP00338 332 aaKnown RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 ADRB2P07550 413 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 GARTP22102 1010 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 CASP1P29466 404 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 TNFSF9P41273 254 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 NRIP1P48552 1158 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 EHHADHQ08426 723 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 KCNA1Q09470 495 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 ADAM15Q13444 863 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 HSP90AA2PQ14568 343 aaPredicted RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 CTC1Q2NKJ3 1217 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 PLPP4Q5VZY2 271 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 KANK3Q6NY19 840 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 DCLRE1AQ6PJP8 1040 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 ADGRD2Q7Z7M1 963 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 RBM23Q86U06 439 aaKnown RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 CD302Q8IX05 232 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 GRAMD1CQ8IYS0 662 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 EFHBQ8N7U6 833 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 POMGNT1Q8WZA1 660 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 HPS3Q969F9 1004 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 DDX27Q96GQ7 796 aaKnown RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 ZBP1Q9H171 429 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 GOLPH3LQ9H4A5 285 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 RPF1Q9H9Y2 349 aaKnown RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 MRPL17Q9NRX2 175 aaKnown RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 MARCH5Q9NX47 278 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 CPSF3Q9UKF6 684 aaKnown RBP11.65□□□□□ -0.54
LINC00239-201ENST00000556973 ADAM28Q9UKQ2 775 aa11.65□□□□□ -0.54
LINC00239-201ENST00000556973 TTC26A0AVF1 554 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 C2orf71A6NGG8 1288 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 CASTOR2A6NHX0 329 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 HIDE1A8MVS5 230 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 PER2O15055 1255 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 MEFVO15553 781 aaPredicted RBP11.64□□□□□ -0.55
LINC00239-201ENST00000556973 KLRC4O43908 158 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 SOD2P04179 222 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 CXCL8P10145 99 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 ADSSP30520 456 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 RPL9P32969 192 aaKnown RBP11.64□□□□□ -0.55
LINC00239-201ENST00000556973 GTF2F1P35269 517 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00239-201ENST00000556973 CLCNKBP51801 687 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 PPP2R3AQ06190 1150 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 DUSP6Q16828 381 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 UPP1Q16831 310 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 GLRA4Q5JXX5 417 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 FAM26FQ5R3K3 315 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 EPM2AIP1Q7L775 607 aaPredicted RBP11.64□□□□□ -0.55
LINC00239-201ENST00000556973 RNF168Q8IYW5 571 aaPredicted RBP11.64□□□□□ -0.55
LINC00239-201ENST00000556973 FMR1NBQ8N0W7 255 aaPredicted RBP11.64□□□□□ -0.55
LINC00239-201ENST00000556973 TMEM87AQ8NBN3 555 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 RABGGTAQ92696 567 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 ZMAT2Q96NC0 199 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms