RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 RARS2Q5T160 578 aaKnown RBP11.32□□□□□ -0.6
SHMT2-224ENST00000556737 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 KANK3Q6NY19 840 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 CD300LGQ6UXG3 332 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 ZPBP2Q6X784 338 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 HAUS6Q7Z4H7 955 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 ZBTB33Q86T24 672 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 C12orf76Q8N812 135 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-224ENST00000556737 ZBTB45Q96K62 511 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-224ENST00000556737 FBXL18Q96ME1 805 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 ZMAT2Q96NC0 199 aaKnown RBP11.32□□□□□ -0.6
SHMT2-224ENST00000556737 C1QTNF1Q9BXJ1 281 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 ADAM7Q9H2U9 754 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 POMKQ9H5K3 350 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 GOLGA2P5Q9HBQ8 144 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 CNTN3Q9P232 1028 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 LARSQ9P2J5 1176 aaKnown RBP11.32□□□□□ -0.6
SHMT2-224ENST00000556737 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 TRIOO75962 3097 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 ANK1P16157 1881 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 TCHHQ07283 1943 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 MTCL1Q9Y4B5 1905 aaKnown RBP11.31□□□□□ -0.6
SHMT2-224ENST00000556737 TSC2P49815 1807 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 SMIM28A0A1B0GU29 152 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 FAM86C2PA6NEL3 165 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 TMEM189-UBE2V1I3L0A0 370 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 K7ENM7 598 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 DCXO43602 365 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 FAM189A1O60320 539 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 PIGRP01833 764 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 WEE2P0C1S8 567 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 HARSP12081 509 aaKnown RBP11.31□□□□□ -0.6
SHMT2-224ENST00000556737 SMTNP53814 917 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 OSTNP61366 133 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 ITIH3Q06033 890 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 MCL1Q07820 350 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 STRN3Q13033 797 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 PKP1Q13835 747 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.6
SHMT2-224ENST00000556737 SEZ6Q53EL9 994 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 HERC4Q5GLZ8 1057 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-224ENST00000556737 APBB1IPQ7Z5R6 666 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-224ENST00000556737 PPFIBP1Q86W92 1011 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 RNF135Q8IUD6 432 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 GPR65Q8IYL9 337 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 LINC00301Q8NCQ3 95 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 C3orf58Q8NDZ4 430 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 RASSF8Q8NHQ8 419 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 CCDC94Q9BW85 323 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-224ENST00000556737 SFXN1Q9H9B4 322 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 PARVGQ9HBI0 331 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 STK17AQ9UEE5 414 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 MUTYHQ9UIF7 546 aa11.31□□□□□ -0.6
SHMT2-224ENST00000556737 GPR37L1O60883 481 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 FAM13AO94988 1023 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 PAPLNO95428 1278 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 ADH1AP07327 375 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 KCNE1P15382 129 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 KLRC2P26717 231 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 CLCNKBP51801 687 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 UPP1Q16831 310 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 USP41Q3LFD5 358 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 SLC39A4Q6P5W5 647 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 PRSS55Q6UWB4 352 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-224ENST00000556737 MAP4K3Q8IVH8 894 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
SHMT2-224ENST00000556737 RIN2Q8WYP3 895 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-224ENST00000556737 PIK3R5Q8WYR1 880 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 DNAJC19Q96DA6 116 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 RPGRIP1Q96KN7 1286 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 LRFN3Q9BTN0 628 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 MAN1C1Q9NR34 630 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 TOPORSQ9NS56 1045 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-224ENST00000556737 CHMP5Q9NZZ3 219 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 FNIP2Q9P278 1114 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 KCNG1Q9UIX4 513 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 TBX20Q9UMR3 447 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
SHMT2-224ENST00000556737 MYMKA6NI61 221 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 H0YCG3 227 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 TRAK2O60296 914 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 TBCAO75347 108 aaKnown RBP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 TADA2AO75478 443 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 PPP1R37O75864 691 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 GLUD1P00367 558 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 CXCL8P10145 99 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 ALADP13716 330 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 RPL17P18621 184 aaKnown RBP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 SCP2P22307 547 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 SP100P23497 879 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 NMT1P30419 496 aaKnown RBP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 DDIT3P35638 169 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 TNFSF9P41273 254 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 MTHFRP42898 656 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 YARSP54577 528 aaKnown RBP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 SLC10A6Q3KNW5 377 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 ZBTB41Q5SVQ8 909 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 TMC5Q6UXY8 1006 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 TMEM130Q8N3G9 435 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms