RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 WDR27A2RRH5 827 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 MYBPHLA2RUH7 354 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 HEPACAM2A8MVW5 462 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 TRIM6-TRIM34B2RNG4 842 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 PATL2C9JE40 543 aaKnown RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 TERTO14746 1132 aaKnown RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 RRP8O43159 456 aaKnown RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 RNF40O75150 1001 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 C22orf31O95567 290 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 APBB3O95704 486 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 ATXN1LP0C7T5 689 aaKnown RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 SKIP12755 728 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 ITPKAP23677 461 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 U2AF2P26368 475 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 TIE1P35590 1138 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 STAT5BP51692 787 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 GHRHRQ02643 423 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 TLE3Q04726 772 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 TNK2Q07912 1038 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 C2orf27AQ580R0 203 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 RTP2Q5QGT7 225 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 GPATCH4Q5T3I0 446 aaKnown RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 ARHGAP40Q5TG30 622 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 PDXDC2PQ6P474 469 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 FUT10Q6P4F1 479 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 CENPQQ7L2Z9 268 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 NLRX1Q86UT6 975 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 TTC30AQ86WT1 665 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 HOMER1Q86YM7 354 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 YAF2Q8IY57 180 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 RNF168Q8IYW5 571 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 ZNF710Q8N1W2 664 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 LRRC71Q8N4P6 559 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 DEFB119Q8N690 84 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 FRMD1Q8N878 549 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 PDCD7Q8N8D1 485 aaKnown RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 RLN3Q8WXF3 142 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 LIN37Q96GY3 246 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 ASB16Q96NS5 453 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 CORO1BQ9BR76 489 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 ZKSCAN3Q9BRR0 538 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 TMEM175Q9BSA9 504 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 BACH2Q9BYV9 841 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 NACAP1Q9BZK3 213 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 FAM117AQ9C073 453 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 C8orf33Q9H7E9 229 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 PRDM16Q9HAZ2 1276 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 CPNE5Q9HCH3 593 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 JPH1Q9HDC5 661 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 TRPV5Q9NQA5 729 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 DACT1Q9NYF0 836 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 CACNG4Q9UBN1 327 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 STK39Q9UEW8 545 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 SEPT9Q9UHD8 586 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 PIN4Q9Y237 131 aaKnown RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 UTP20O75691 2785 aaKnown RBP4.82□□□□□ -1.64
ATXN3-242ENST00000556644 FRMPD4Q14CM0 1322 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 BLACEA4D250 179 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 CARNS1A5YM72 827 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 TTLL13PA6NNM8 815 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 ZBTB42B2RXF5 422 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 DDX39AO00148 427 aaKnown RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 BACH1O14867 736 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 EFEMP2O95967 443 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 EGFP01133 1207 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 HLA-EP13747 358 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 DARSP14868 501 aaKnown RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 GNAT2P19087 354 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 EIF4BP23588 611 aaKnown RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 HOXA9P31269 272 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 CCR2P41597 374 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 ACTR2P61160 394 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 RHDQ02161 417 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 GFPT1Q06210 699 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 HNRNPDQ14103 355 aaKnown RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 USP41Q3LFD5 358 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 AXDND1Q5T1B0 1012 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 NAIF1Q69YI7 327 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 ANO7Q6IWH7 933 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 FSTL4Q6MZW2 842 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 AGMOQ6ZNB7 445 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 FAM43BQ6ZT52 329 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 RALGPS2Q86X27 583 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 ERC1Q8IUD2 1116 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 SYT12Q8IV01 421 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 SPACA3Q8IXA5 215 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 COLGALT2Q8IYK4 626 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 CLASRPQ8N2M8 674 aaKnown RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 CAMKK1Q8N5S9 505 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 DAGLBQ8NCG7 672 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 GIMAP8Q8ND71 665 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 ZSCAN18Q8TBC5 510 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 WHAMMQ8TF30 809 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 HASPINQ8TF76 798 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 SETD7Q8WTS6 366 aaKnown RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 DEPDC1BQ8WUY9 529 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 SMARCD2Q92925 531 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 MED8Q96G25 268 aa4.81□□□□□ -1.64
ATXN3-242ENST00000556644 NAF1Q96HR8 494 aaKnown RBP4.81□□□□□ -1.64
ATXN3-242ENST00000556644 CLSTN3Q9BQT9 956 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms