RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TRPC3Q13507 836 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 IKBKEQ14164 716 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 EXOC3L4Q17RC7 722 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 TSR1Q2NL82 804 aaKnown RBP9.98□□□□□ -0.81
ACTN1-218ENST00000556343 WDR44Q5JSH3 913 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 SPECC1LQ69YQ0 1117 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 CRELD2Q6UXH1 353 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-218ENST00000556343 SLC24A5Q71RS6 500 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 APTXQ7Z2E3 356 aaKnown RBP9.98□□□□□ -0.81
ACTN1-218ENST00000556343 TMC6Q7Z403 805 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 FMNL3Q8IVF7 1028 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 VSTM4Q8IW00 320 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 ZNF397Q8NF99 534 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-218ENST00000556343 NEK11Q8NG66 645 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 RSPH1Q8WYR4 309 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 ERGIC2Q96RQ1 377 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 RPS6KC1Q96S38 1066 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 EIF2AQ9BY44 585 aaKnown RBP9.98□□□□□ -0.81
ACTN1-218ENST00000556343 IMPG2Q9BZV3 1241 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 HAPLN2Q9GZV7 340 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 RGS18Q9NS28 235 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 TBX21Q9UL17 535 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 GIT1Q9Y2X7 761 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 C2CD2Q9Y426 696 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 IPPQ9Y573 584 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 ITIH6Q6UXX5 1313 aa9.98□□□□□ -0.81
ACTN1-218ENST00000556343 KIAA0100Q14667 2235 aaKnown RBP9.97□□□□□ -0.81
ACTN1-218ENST00000556343 LRRIQ3A6PVS8 624 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-218ENST00000556343 LACTBL1A8MY62 500 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 HOXA2O43364 376 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 CXCL10P02778 98 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 ADRB2P07550 413 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TRIM49P0CI25 452 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TRIM49CP0CI26 452 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 CXCL8P10145 99 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 ACTN1P12814 892 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TRIM21P19474 475 aaKnown RBP9.97□□□□□ -0.81
ACTN1-218ENST00000556343 CYP2C18P33260 490 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TNFSF9P41273 254 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 GCLMP48507 274 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 GSDMDP57764 484 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 CLDN10P78369 228 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TFAMQ00059 246 aaKnown RBP9.97□□□□□ -0.81
ACTN1-218ENST00000556343 DSC3Q14574 896 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TMEM132DQ14C87 1099 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 ENOX2Q16206 610 aaKnown RBP9.97□□□□□ -0.81
ACTN1-218ENST00000556343 SEZ6Q53EL9 994 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 PLEKHG4Q58EX7 1191 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 MIIPQ5JXC2 388 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 UBXN11Q5T124 520 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 MFSD5Q6N075 450 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 CNKSR3Q6P9H4 555 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 MRPL10Q7Z7H8 261 aaKnown RBP9.97□□□□□ -0.81
ACTN1-218ENST00000556343 EHBP1Q8NDI1 1231 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 DBF4BQ8NFT6 615 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 BEST2Q8NFU1 509 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 APOL6Q9BWW8 343 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 EDEM3Q9BZQ6 932 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-218ENST00000556343 MMRN2Q9H8L6 949 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 PDE11AQ9HCR9 933 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 SLC38A7Q9NVC3 462 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 LRFN2Q9ULH4 789 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 PCDHB7Q9Y5E2 793 aa9.97□□□□□ -0.81
ACTN1-218ENST00000556343 TRIP12Q14669 1992 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-218ENST00000556343 FRMPD3Q5JV73 1810 aa9.96□□□□□ -0.81
ACTN1-218ENST00000556343 TTC26A0AVF1 554 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 CCDC85CA6NKD9 419 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 TEX33O43247 280 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 AP5Z1O43299 807 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 FAM189A1O60320 539 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 EVI5O60447 810 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 NBNO60934 754 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 ZC3H11AO75152 810 aaKnown RBP eCLIP9.96□□□□□ -0.82
ACTN1-218ENST00000556343 CLSTN1O94985 981 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 ATF7P17544 494 aaPredicted RBP9.96□□□□□ -0.82
ACTN1-218ENST00000556343 RFX1P22670 979 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 RBP5P82980 135 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 PPIGQ13427 754 aaKnown RBP eCLIP9.96□□□□□ -0.821e-12■□□□□ 8.7
ACTN1-218ENST00000556343 SYCP1Q15431 976 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 SLC10A6Q3KNW5 377 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 SV2AQ7L0J3 742 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 CACNA2D4Q7Z3S7 1137 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 UBE2Q1Q7Z7E8 422 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 ECHDC2Q86YB7 292 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 RNF169Q8NCN4 708 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 FBXL13Q8NEE6 735 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 ZSWIM2Q8NEG5 633 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 URGCPQ8TCY9 931 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 TAF4BQ92750 862 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 ABHD8Q96I13 439 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 SCLYQ96I15 445 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 LSM14BQ9BX40 385 aaKnown RBP9.96□□□□□ -0.82
ACTN1-218ENST00000556343 TMEM117Q9H0C3 514 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 NUCKS1Q9H1E3 243 aaKnown RBP9.96□□□□□ -0.82
ACTN1-218ENST00000556343 TMX1Q9H3N1 280 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 NXF3Q9H4D5 531 aaKnown RBP9.96□□□□□ -0.82
ACTN1-218ENST00000556343 ELAC1Q9H777 363 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms