RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 NAB2Q15742 525 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 KYAT1Q16773 422 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 NOMO2Q5JPE7 1267 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 CT47A1Q5JQC4 288 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 C1orf220Q5T0J3 134 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 CEP135Q66GS9 1140 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 GLB1LQ6UWU2 654 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 ZNF280BQ86YH2 543 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 CSGALNACT2Q8N6G5 542 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 TSG101Q99816 390 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 SRRTQ9BXP5 876 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 MTIF3Q9H2K0 278 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 RPF1Q9H9Y2 349 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 PDE11AQ9HCR9 933 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 UBN1Q9NPG3 1134 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 INPP5FQ9Y2H2 1132 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 MICAL3Q7RTP6 2002 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 COL4A6Q14031 1691 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 BICDL2A1A5D9 508 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 CETN3O15182 167 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 POMCP01189 267 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 KCNE1P15382 129 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 RPL13P26373 211 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 PBX2P40425 430 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 SCNN1GP51170 649 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 MCCD1P59942 119 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 POU5F1Q01860 360 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 NCAPHQ15003 741 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 ZBTB6Q15916 424 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 PAN2Q504Q3 1202 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 GLRA4Q5JXX5 417 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 BRSK2Q8IWQ3 736 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 ENOX1Q8TC92 643 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 C18orf25Q96B23 403 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 POP1Q99575 1024 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 RAD9AQ99638 391 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 TMEM117Q9H0C3 514 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 PLEKHA5Q9HAU0 1116 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 TBC1D13Q9NVG8 400 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 RBAKQ9NYW8 714 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 CNTN3Q9P232 1028 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 PTPRJQ12913 1337 aa12.46□□□□□ -0.41
GABRB3-210ENST00000556166 DDHD2O94830 711 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 NFICP08651 508 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 LINC00271P0C7V0 271 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 IGFBP6P24592 240 aaPredicted RBP12.46□□□□□ -0.42
GABRB3-210ENST00000556166 PSMC2P35998 433 aaKnown RBP12.46□□□□□ -0.42
GABRB3-210ENST00000556166 YARSP54577 528 aaKnown RBP12.46□□□□□ -0.42
GABRB3-210ENST00000556166 ZNF445P59923 1031 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 DLG4P78352 724 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 SOX4Q06945 474 aaPredicted RBP12.46□□□□□ -0.42
GABRB3-210ENST00000556166 PSMD6Q15008 389 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 SPATA1Q5VX52 437 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 JADE1Q6IE81 842 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 FILIP1Q7Z7B0 1213 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 DHX40Q8IX18 779 aaKnown RBP12.46□□□□□ -0.42
GABRB3-210ENST00000556166 EFCAB13Q8IY85 973 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.42
GABRB3-210ENST00000556166 ZNF516Q92618 1163 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 CEP63Q96MT8 703 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 PPP1R10Q96QC0 940 aaKnown RBP12.46□□□□□ -0.42
GABRB3-210ENST00000556166 YME1L1Q96TA2 773 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 HSD3B7Q9H2F3 369 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 CWH43Q9H720 699 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 SAMSN1Q9NSI8 373 aaKnown RBP12.46□□□□□ -0.42
GABRB3-210ENST00000556166 CACNG4Q9UBN1 327 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 INSL6Q9Y581 213 aa12.46□□□□□ -0.42
GABRB3-210ENST00000556166 LAMA3Q16787 3333 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-210ENST00000556166 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-210ENST00000556166 HOXA2O43364 376 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 TLL1O43897 1013 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 GUCY2FP51841 1108 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 IQCB1Q15051 598 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 PRPF38BQ5VTL8 546 aaKnown RBP12.45□□□□□ -0.42
GABRB3-210ENST00000556166 LRSAM1Q6UWE0 723 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 FAM186BQ8IYM0 893 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 OR5B17Q8NGF7 314 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 PARD3BQ8TEW8 1205 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 CCDC127Q96BQ5 260 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 TOPORSQ9NS56 1045 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-210ENST00000556166 FANCLQ9NW38 375 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-210ENST00000556166 FRMD4BQ9Y2L6 1034 aa12.45□□□□□ -0.42
GABRB3-210ENST00000556166 MRPL42Q9Y6G3 142 aaKnown RBP12.45□□□□□ -0.42
GABRB3-210ENST00000556166 PTPRSQ13332 1948 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-210ENST00000556166 MAPK13O15264 365 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 SLC16A3O15427 465 aaKnown RBP12.44□□□□□ -0.42
GABRB3-210ENST00000556166 IL18RAPO95256 599 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 ZNF165P49910 485 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms