RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 RPL9P32969 192 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 GRM5P41594 1212 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 MCM2P49736 904 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 YARSP54577 528 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 DMP1Q13316 513 aaPredicted RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 RABEP1Q15276 862 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 ECM1Q16610 540 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 RTP2Q5QGT7 225 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 NT5DC1Q5TFE4 455 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 FAM171A1Q5VUB5 890 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 ARL6IP4Q66PJ3 421 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 PHLDB3Q6NSJ2 640 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 RINT1Q6NUQ1 792 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 ANKS3Q6ZW76 656 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 C1orf186Q6ZWK4 172 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 CDR2LQ86X02 465 aaPredicted RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 PALB2Q86YC2 1186 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 SLC44A3Q8N4M1 653 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 SPIRE2Q8WWL2 714 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 ATOH1Q92858 354 aaPredicted RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 DRC1Q96MC2 740 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 PPP1R10Q96QC0 940 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 TSPAN18Q96SJ8 248 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 ACO2Q99798 780 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 CLSTN3Q9BQT9 956 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 CCDC94Q9BW85 323 aaPredicted RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 MRPL4Q9BYD3 311 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 MFSD1Q9H3U5 465 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 DDX19AQ9NUU7 478 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 ARHGAP28Q9P2N2 729 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 FBXW11Q9UKB1 542 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 MAFFQ9ULX9 164 aa8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 MTCL1Q9Y4B5 1905 aaKnown RBP8.56□□□□□ -1.04
PTCSC3-201ENST00000556013 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 TTLL13PA6NNM8 815 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 ANHXE9PGG2 379 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 H0YCG3 227 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 SYN3O14994 580 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 N4BP1O75113 896 aaKnown RBP8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 XYLBO75191 536 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 RFPL2O75678 378 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 B3GAT3O94766 335 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 PDGFBP01127 241 aaPredicted RBP8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 MCF2P10911 925 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 KCNE1P15382 129 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 NPR3P17342 541 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 PROZP22891 400 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 PAX3P23760 479 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 GBP2P32456 591 aaPredicted RBP8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 NBL1P41271 181 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 NPTX2P47972 431 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 FOSBP53539 338 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 SMTNP53814 917 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 PEX3P56589 373 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 PSMD5Q16401 504 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 UPP1Q16831 310 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 LIN9Q5TKA1 542 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 EEF1DP3Q658K8 133 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 TMEM105Q8N8V8 129 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 SYT2Q8N9I0 419 aaPredicted RBP8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 SNX29Q8TEQ0 813 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 AK8Q96MA6 479 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 ACAP3Q96P50 834 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 PAAF1Q9BRP4 392 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 SEMA4AQ9H3S1 761 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 SLC2A4RGQ9NR83 387 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 MTRRQ9UBK8 725 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 KCNH3Q9ULD8 1083 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 PCDHB6Q9Y5E3 794 aa8.55□□□□□ -1.04
PTCSC3-201ENST00000556013 ARID2Q68CP9 1835 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 TDRD15B5MCY1 1934 aaKnown RBP8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 CASTOR2A6NHX0 329 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 CCDC169A6NNP5 214 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 E9PMD0 336 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 F8W810 466 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 TOM1L1O75674 476 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 MICAL2O94851 1124 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 KIF4AO95239 1232 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 BMP15O95972 392 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 ABCD1P33897 745 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 ATP2C1P98194 919 aaPredicted RBP8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 KYAT1Q16773 422 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 C8orf34Q49A92 452 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 PPM1LQ5SGD2 360 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 SLC8B1Q6J4K2 584 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 RSPO2Q6UXX9 243 aaPredicted RBP8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 ZPBP2Q6X784 338 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 CEP57Q86XR8 500 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 CCDC105Q8IYK2 499 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 DAW1Q8N136 415 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 ZNF461Q8TAF7 563 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 SHDQ96IW2 340 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 MYADMQ96S97 322 aa8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 MMTAG2Q9BU76 263 aaKnown RBP8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 OXCT2Q9BYC2 517 aaPredicted RBP8.54□□□□□ -1.04
PTCSC3-201ENST00000556013 PLEKHA5Q9HAU0 1116 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms