RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TCF15Q12870 199 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 MAPK7Q13164 816 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 TDGQ13569 410 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 RINT1Q6NUQ1 792 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 C1orf186Q6ZWK4 172 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 LNX1Q8TBB1 728 aaPredicted RBP13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 FEZF2Q8TBJ5 459 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 KCNN1Q92952 543 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 ACO2Q99798 780 aaKnown RBP13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 MRPL4Q9BYD3 311 aaKnown RBP13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 PRKD2Q9BZL6 878 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 DUSP12Q9UNI6 340 aa13.96□□□□□ -0.17
HNRNPC-221ENST00000555883 USP34Q70CQ2 3546 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 CASTOR2A6NHX0 329 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 E9PMD0 336 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 HIP1RO75146 1068 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 RFPL2O75678 378 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 ZMYND10O75800 440 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 HNRNPA1P09651 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 PROZP22891 400 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 MRE11P49959 708 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 CLCN5P51795 746 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 VCPP55072 806 aaKnown RBP13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 PEX3P56589 373 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 FAM171A1Q5VUB5 890 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 DCLRE1AQ6PJP8 1040 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 ALKAL1Q6UXT8 129 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 ALYREFQ86V81 257 aaKnown RBP13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 PALB2Q86YC2 1186 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 SPIRE2Q8WWL2 714 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 SMG7Q92540 1137 aaKnown RBP13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 B3GALT6Q96L58 329 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 CLSTN3Q9BQT9 956 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 KCNK12Q9HB15 430 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 SLC38A7Q9NVC3 462 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 FBXW11Q9UKB1 542 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 ZFP37Q9Y6Q3 630 aaPredicted RBP13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 ZDBF2Q9HCK1 2354 aa13.95□□□□□ -0.18
HNRNPC-221ENST00000555883 CCDC169A6NNP5 214 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 TRAPPC3O43617 180 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 N4BP1O75113 896 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 MCF2P10911 925 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 LIG1P18858 919 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 SCP2P22307 547 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 FGFR3P22607 806 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 GJB2P29033 226 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 PLXNA3P51805 1871 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 YARSP54577 528 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 PSMD5Q16401 504 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 UPP1Q16831 310 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 MCTP1Q6DN14 999 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 TAS1R3Q7RTX0 852 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 KCNK18Q7Z418 384 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 SYT2Q8N9I0 419 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 RABGGTAQ92696 567 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 DDX27Q96GQ7 796 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 AK8Q96MA6 479 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 RUSC1Q9BVN2 902 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 CCDC94Q9BW85 323 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 CDT1Q9H211 546 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 KMT5AQ9NQR1 393 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 USP20Q9Y2K6 914 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 GDAQ9Y2T3 454 aa13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-221ENST00000555883 C2orf16Q68DN1 1984 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 SMIM28A0A1B0GU29 152 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 H3BQV1 296 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 ABLIM1O14639 778 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 B3GAT3O94766 335 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 PDGFBP01127 241 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 PLS3P13797 630 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 KCNE1P15382 129 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 CDC25AP30304 524 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 SMTNP53814 917 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 RAB33AQ14088 237 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 UVSSAQ2YD98 709 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 ZNF568Q3ZCX4 644 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 LIN9Q5TKA1 542 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 PRSS55Q6UWB4 352 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 HASPINQ8TF76 798 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 CXCL16Q9H2A7 254 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 PIDD1Q9HB75 910 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 CNTN3Q9P232 1028 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 MTRRQ9UBK8 725 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 CACNG4Q9UBN1 327 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 BACE2Q9Y5Z0 518 aa13.93□□□□□ -0.18
HNRNPC-221ENST00000555883 H0YCG3 227 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 TOM1L1O75674 476 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 CD2BP2O95400 341 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 BMP15O95972 392 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 SPATA31D3P0C874 917 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 LAMP2P13473 410 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 RPL17P18621 184 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 GBP2P32456 591 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms