RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.643e-7■■■□□ 16.5
SRP54-208ENST00000555557 LACTBL1A8MY62 500 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 MGEA5O60502 916 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 NOL4O94818 638 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 IBSPP21815 317 aaPredicted RBP11.05□□□□□ -0.64
SRP54-208ENST00000555557 MXI1P50539 228 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 CLDN10P78369 228 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 FAAP100Q0VG06 881 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 LRMPQ12912 555 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 PAK2Q13177 524 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 DCAF4L1Q3SXM0 396 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 KRT39Q6A163 491 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 DPY19L2P1Q6NXN4 242 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 GJB7Q6PEY0 223 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 ANKRD33Q7Z3H0 272 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 USP37Q86T82 979 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 TC2NQ8N9U0 490 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 CAGE1Q8TC20 777 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 TAS1R2Q8TE23 839 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 SEMA4DQ92854 862 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 ACAP3Q96P50 834 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 TTYH3Q9C0H2 523 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 TMX1Q9H3N1 280 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 C11orf49Q9H6J7 331 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 TMEM8AQ9HCN3 771 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 ERVK-5Q9HDB9 667 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 ATP11BQ9Y2G3 1177 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 CAND2O75155 1236 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 C4BPAP04003 597 aaKnown RBP11.05□□□□□ -0.64
SRP54-208ENST00000555557 SELPP16109 830 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 GRM5P41594 1212 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 POLR2FP61218 127 aaKnown RBP11.05□□□□□ -0.64
SRP54-208ENST00000555557 GPNMBQ14956 572 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 TDRD10Q5VZ19 366 aaKnown RBP11.05□□□□□ -0.64
SRP54-208ENST00000555557 LRRC8DQ7L1W4 858 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 LRRC8AQ8IWT6 810 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 EFCAB13Q8IY85 973 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 ANKLE1Q8NAG6 615 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 SMG8Q8ND04 991 aaKnown RBP11.05□□□□□ -0.64
SRP54-208ENST00000555557 NEK11Q8NG66 645 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 LMO3Q8TAP4 145 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 TRIM44Q96DX7 344 aaPredicted RBP11.05□□□□□ -0.64
SRP54-208ENST00000555557 CGRRF1Q99675 332 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 PPP1R12CQ9BZL4 782 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 MTMR12Q9C0I1 747 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 KCNF1Q9H3M0 494 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 SIX2Q9NPC8 291 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 NLRC4Q9NPP4 1024 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 IPPQ9Y573 584 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 MROH7Q68CQ1 1323 aa11.05□□□□□ -0.64
SRP54-208ENST00000555557 GTPBP10A4D1E9 387 aaKnown RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 DCDC2CA8MYV0 355 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 AKR1B15C9JRZ8 316 aaPredicted RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 TLR3O15455 904 aaKnown RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 STX10O60499 249 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 NFICP08651 508 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 ZSCAN20P17040 1043 aaPredicted RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 EN2P19622 333 aaPredicted RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 KRT9P35527 623 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 CCL23P55773 120 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 GSDMDP57764 484 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 TFAMQ00059 246 aaKnown RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 BIRC3Q13489 604 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 BFSP2Q13515 415 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 HSP90AA2PQ14568 343 aaPredicted RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 LRRC26Q2I0M4 334 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 EPC2Q52LR7 807 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 KLHDC7AQ5VTJ3 777 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 JADE1Q6IE81 842 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 TRIM65Q6PJ69 517 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 C15orf39Q6ZRI6 1047 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 EHBP1Q8NDI1 1231 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 SCLYQ96I15 445 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 PI4K2AQ9BTU6 479 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 NUP58Q9BVL2 599 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 INTS2Q9H0H0 1204 aaKnown RBP11.04□□□□□ -0.64
SRP54-208ENST00000555557 KLK14Q9P0G3 267 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 PARP2Q9UGN5 583 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 CAPN11Q9UMQ6 739 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 PCDHB2Q9Y5E7 798 aa11.04□□□□□ -0.64
SRP54-208ENST00000555557 MEIS3P2A8K0S8 358 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 NBNO60934 754 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 N4BP1O75113 896 aaKnown RBP11.03□□□□□ -0.64
SRP54-208ENST00000555557 MFAP3LO75121 409 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 RECQL4O94761 1208 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 VNN1O95497 513 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 CST3P01034 146 aaPredicted RBP11.03□□□□□ -0.64
SRP54-208ENST00000555557 GTF2H1P32780 548 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 ENPEPQ07075 957 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 CETN1Q12798 172 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 ZACNQ401N2 412 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
SRP54-208ENST00000555557 WDR49Q8IV35 697 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 TOX2Q96NM4 488 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 ADAM2Q99965 735 aa11.03□□□□□ -0.64
SRP54-208ENST00000555557 IFIH1Q9BYX4 1025 aaKnown RBP11.03□□□□□ -0.64
SRP54-208ENST00000555557 GANQ9H2C0 597 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms