RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TOMM20Q15388 145 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PTRHD1Q6GMV3 140 aaKnown RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TMEM154Q6P9G4 183 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 CLEC4FQ8N1N0 589 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TMC2Q8TDI7 906 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SH3GL3Q99963 347 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 POLD4Q9HCU8 107 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PI4KBQ9UBF8 816 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 NBPF26B4DH59 902 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PRKAB2O43741 272 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PGK2P07205 417 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 MLH1P40692 756 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF658Q5TYW1 1059 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF772Q68DY9 489 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 LRRC8AQ8IWT6 810 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 CLYBLQ8N0X4 340 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 DCAF4Q8WV16 495 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 EXO5Q9H790 373 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 MARCOQ9UEW3 520 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 RNF123Q5XPI4 1314 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 A0A087WUV0 522 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ERVV-2B6SEH9 535 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 GCFC2P16383 781 aaKnown RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TYK2P29597 1187 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 BCAR1P56945 870 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 NBPF9Q3BBW0 867 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TTLL6Q8N841 843 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 BRIP1Q9BX63 1249 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 LMBRD1Q9NUN5 540 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PIN4Q9Y237 131 aaKnown RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 FAM107AO95990 144 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 HPGDP15428 266 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PRELPP51888 382 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PHACTR4Q8IZ21 702 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SPRTNQ9H040 489 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TRIM13O60858 407 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ITGAXP20702 1163 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SERPINB3P29508 390 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 CCDC103Q8IW40 242 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SENP2Q9HC62 589 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 KRCC1Q9NPI7 259 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SESN1Q9Y6P5 492 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 LAMC3Q9Y6N6 1575 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 AKAP10O43572 662 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SEPT2Q15019 361 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PLCL1Q15111 1095 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 CNGA2Q16280 664 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 C11orf88Q6PI97 169 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TMEM35BQ8NCS4 154 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 GPR63Q9BZJ6 419 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 RWDD2AQ9UIY3 292 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 MLH3Q9UHC1 1453 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SDK1Q7Z5N4 2213 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SYNGAP1Q96PV0 1343 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 F8W810 466 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TK2O00142 265 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 PDIA3P30101 505 aaKnown RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TMEM62Q0P6H9 643 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 NR1H3Q13133 447 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 EIF2B5Q13144 721 aaKnown RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 TFDP2Q14188 446 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 MTERF3Q96E29 417 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 GINS4Q9BRT9 223 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 BHMT2Q9H2M3 363 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 STN1Q9H668 368 aaKnown RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 FCER1AP12319 257 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 MAPRE2Q15555 327 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ZRANB3Q5FWF4 1079 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF564Q8TBZ8 553 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 SLC9A2Q9UBY0 812 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 NRBP1Q9UHY1 535 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 UHRF1BP1Q6BDS2 1440 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 GNA15P30679 374 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 KRT20P35900 424 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 RGS7P49802 495 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 RAB14P61106 215 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 FKBP3Q00688 224 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 KDSRQ06136 332 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 LMBRD2Q68DH5 695 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 DPP10Q8N608 796 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 TADA1Q96BN2 335 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 GABBR1Q9UBS5 961 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 FBXL21Q9UKT6 434 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 PAIP2BQ9ULR5 123 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 IQCA1LA6NCM1 817 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 PCNAP12004 261 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 GTF2E2P29084 291 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 RAD23BP54727 409 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 MAGOHP61326 146 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 ARHGAP15Q53QZ3 475 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 GALNT4Q8N4A0 578 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SH3RF3Q8TEJ3 882 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 TSPAN17Q96FV3 270 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 PUS3Q9BZE2 481 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 RRAGDQ9NQL2 400 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 PCDHB7Q9Y5E2 793 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 HSD17B4P51659 736 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 TAF13Q15543 124 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 LRRC36Q1X8D7 754 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 REXO4Q9GZR2 422 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms