RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MCCD1P59942 119 aaPredicted RBP17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 SEZ6Q53EL9 994 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 INTS8Q75QN2 995 aaKnown RBP17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 NT5DC4Q86YG4 428 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 CBWD2Q8IUF1 395 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 HERC6Q8IVU3 1022 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 TMEM192Q8IY95 271 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 TDHQ8IZJ6 230 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 MFSD14AQ96MC6 490 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 RPS6KC1Q96S38 1066 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 SRRTQ9BXP5 876 aaKnown RBP17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 THAP9Q9H5L6 903 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 METTL14Q9HCE5 456 aaKnown RBP17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 RNF19AQ9NV58 838 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 DERAQ9Y315 318 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 A0A1W2PPC1 479 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 ARL5CA6NH57 179 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 MEIS3P2A8K0S8 358 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 RBAK-RBAKDNI3L0D1 243 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 UPP2O95045 317 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 KCNE1P15382 129 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 CASP4P49662 377 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 MARSP56192 900 aaKnown RBP17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 HTRA4P83105 476 aaPredicted RBP17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 CYP24A1Q07973 514 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 PSMD6Q15008 389 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 CLLU1OSQ5K130 101 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 FAM114A1Q8IWE2 563 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 FAM186BQ8IYM0 893 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 ZSWIM2Q8NEG5 633 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 URGCPQ8TCY9 931 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 TMC2Q8TDI7 906 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 ZNF689Q96CS4 500 aaPredicted RBP17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 GAD1Q99259 594 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 TSPY26PQ9H489 355 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 RC3H2Q9HBD1 1191 aaKnown RBP17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 INSL6Q9Y581 213 aa17.86■□□□□ 0.45
SPTLC2-203ENST00000554901 SMTNL1A8MU46 457 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 FGFR1P11362 822 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 MLH1P40692 756 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 NOMO2Q5JPE7 1267 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 FRMD5Q7Z6J6 570 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 CMTR2Q8IYT2 770 aaKnown RBP17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 RDH13Q8NBN7 331 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 HELQQ8TDG4 1101 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 CASD1Q96PB1 797 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 RAD9AQ99638 391 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 SLC38A7Q9NVC3 462 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 C2CD2Q9Y426 696 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 NFE2L3Q9Y4A8 694 aa17.85■□□□□ 0.45
SPTLC2-203ENST00000554901 CARNS1A5YM72 827 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 XPOTO43592 962 aaKnown RBP17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 KRT13P13646 458 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 IBSPP21815 317 aaPredicted RBP17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 GRIK3Q13003 919 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 GSTCDQ8NEC7 633 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 FAM200AQ8TCP9 573 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 PARD3BQ8TEW8 1205 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 BORCS6Q96GS4 357 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 ZBED2Q9BTP6 218 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 KLK14Q9P0G3 267 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 ARMCX3Q9UH62 379 aaPredicted RBP17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 COL4A6Q14031 1691 aa17.84■□□□□ 0.45
SPTLC2-203ENST00000554901 SMIM28A0A1B0GU29 152 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 LACTBL1A8MY62 500 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 PTGESO14684 152 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 MEFVO15553 781 aaPredicted RBP17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 THP07101 528 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 AP3M2P53677 418 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 CLDN10P78369 228 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 BFSP1Q12934 665 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 WDR49Q8IV35 697 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 LRRC43Q8N309 656 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 EEF2KMTQ96G04 330 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 ZFP42Q96MM3 310 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 FNBP1Q96RU3 617 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 YME1L1Q96TA2 773 aa17.83■□□□□ 0.45
SPTLC2-203ENST00000554901 CITO14578 2027 aa17.83■□□□□ 0.44
SPTLC2-203ENST00000554901 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 BECN2A8MW95 431 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 PRKCSHP14314 528 aaPredicted RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 CYP3A5P20815 502 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 SCNN1GP51170 649 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 VAMP7P51809 220 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 NCAPHQ15003 741 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 IQCB1Q15051 598 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 ZBTB6Q15916 424 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 CCDC40Q4G0X9 1142 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 PRPF38BQ5VTL8 546 aaKnown RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 CHRDL2Q6WN34 429 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 AOPEPQ8N6M6 819 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 SP7Q8TDD2 431 aaPredicted RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 CACTINQ8WUQ7 758 aaKnown RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 FAM212AQ96EL1 285 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 PPP1R10Q96QC0 940 aaKnown RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 PDE11AQ9HCR9 933 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 UBQLN1Q9UMX0 589 aaKnown RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 RALGAPA2Q2PPJ7 1873 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 TBKBP1A7MCY6 615 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms