RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 ELMSAN1Q6PJG2 1045 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 CCDC149Q6ZUS6 474 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 ST13P5Q8NFI4 369 aaPredicted RBP13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 LRRC15Q8TF66 581 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 SMG7Q92540 1137 aaKnown RBP13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 ACSF2Q96CM8 615 aaPredicted RBP13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 BICD1Q96G01 975 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 CALML4Q96GE6 196 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 TTPALQ9BTX7 342 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 NT5C3AQ9H0P0 336 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 RXFP1Q9HBX9 757 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 ANKFY1Q9P2R3 1169 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 TNFSF13BQ9Y275 285 aa13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 RBM19Q9Y4C8 960 aaKnown RBP13.51□□□□□ -0.25
CCDC85C-202ENST00000554877 I3L4J1 428 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 TGM5O43548 720 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 B3GAT3O94766 335 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 BRD1O95696 1058 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 PDGFBP01127 241 aaPredicted RBP13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 CLCNKBP51801 687 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 MAPK7Q13164 816 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 PKP1Q13835 747 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 SF3A1Q15459 793 aaKnown RBP13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 PSMD5Q16401 504 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 SPECC1Q5M775 1068 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 RTP2Q5QGT7 225 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 TAS1R3Q7RTX0 852 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 GPBP1Q86WP2 473 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 SYT2Q8N9I0 419 aaPredicted RBP13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 ACAP3Q96P50 834 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 CDT1Q9H211 546 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 TMEM134Q9H6X4 195 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 CHST7Q9NS84 486 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 DPP7Q9UHL4 492 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 POLIQ9UNA4 740 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
CCDC85C-202ENST00000554877 PHLPP2Q6ZVD8 1323 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 SMIM28A0A1B0GU29 152 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 PLS3P13797 630 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 BRCC3P46736 316 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 ARPP19P56211 112 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 MCM6Q14566 821 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 KARSQ15046 597 aaKnown RBP13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 IER5LQ5T953 404 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 OTOP3Q7RTS5 596 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 RNF168Q8IYW5 571 aaPredicted RBP13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 TOPORSQ9NS56 1045 aaPredicted RBP13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 SORCS3Q9UPU3 1222 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 ZDHHC9Q9Y397 364 aa13.49□□□□□ -0.25
CCDC85C-202ENST00000554877 ADAM12O43184 909 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 FAM13AO94988 1023 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 EFEMP2O95967 443 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 GUCY2CP25092 1073 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 OR1D2P34982 312 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 GRM5P41594 1212 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 SLC12A3P55017 1021 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 SPAG1Q07617 926 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 MPZL3Q6UWV2 235 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 FBXL6Q8N531 539 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 LNX1Q8TBB1 728 aaPredicted RBP13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 PPP1R10Q96QC0 940 aaKnown RBP13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 USP28Q96RU2 1077 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 CLSTN3Q9BQT9 956 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 TIPINQ9BVW5 301 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 FNIP2Q9P278 1114 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 ARHGAP28Q9P2N2 729 aa13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 FBXO2Q9UK22 296 aaPredicted RBP13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 TDRD15B5MCY1 1934 aaKnown RBP13.48□□□□□ -0.25
CCDC85C-202ENST00000554877 STK25O00506 426 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 CCL16O15467 120 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 MCF2P10911 925 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 PLCG1P19174 1290 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 TKTP29401 623 aaKnown RBP13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 DDIT3P35638 169 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 CREMQ03060 361 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 SOX4Q06945 474 aaPredicted RBP13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 ELAVL2Q12926 359 aaKnown RBP13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 NAB2Q15742 525 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 TMEM119Q4V9L6 283 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 ARSHQ5FYA8 562 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 PPM1LQ5SGD2 360 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 LIN9Q5TKA1 542 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 GET4Q7L5D6 327 aaPredicted RBP13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 ALYREFQ86V81 257 aaKnown RBP13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 ZDHHC14Q8IZN3 488 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 TMEM130Q8N3G9 435 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 TMEM161BQ8NDZ6 487 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 RSAD2Q8WXG1 361 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 PANK2Q9BZ23 570 aa13.47□□□□□ -0.25
CCDC85C-202ENST00000554877 MFSD1Q9H3U5 465 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms