RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 TNFRSF1AP19438 455 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 DDCP20711 480 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 CDC42EP1Q00587 391 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 TOB2Q14106 344 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-214ENST00000554819 RSPH3Q86UC2 560 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 DRC7Q8IY82 874 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 ANKRD13AQ8IZ07 590 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 CPA6Q8N4T0 437 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 FBXO18Q8NFZ0 1043 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 OR10H5Q8NGA6 315 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 SLC35B2Q8TB61 432 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 ZNF747Q9BV97 191 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 LDAHQ9H6V9 325 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 TCF7L1Q9HCS4 588 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 FAM30AQ9NZY2 134 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 CEP72Q9P209 647 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 SORCS3Q9UPU3 1222 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 PCDHA13Q9Y5I0 950 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 CCDC154A6NI56 674 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 PPFIA4O75335 1185 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 POMCP01189 267 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 AMY1AP04745 511 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 C1SP09871 688 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 ALDH1A3P47895 512 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 CREMQ03060 361 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 MTM1Q13496 603 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 TUBA3CQ13748 450 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 TTF1Q15361 905 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-214ENST00000554819 TUBA3EQ6PEY2 450 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 CMTR2Q8IYT2 770 aaKnown RBP5.27□□□□□ -1.57
SCFD1-214ENST00000554819 CACTINQ8WUQ7 758 aaKnown RBP5.27□□□□□ -1.57
SCFD1-214ENST00000554819 HSPBAP1Q96EW2 488 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 ZNF341Q9BYN7 854 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-214ENST00000554819 ANKRD6Q9Y2G4 727 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 ACTL7AQ9Y615 435 aa5.27□□□□□ -1.57
SCFD1-214ENST00000554819 CFAP20Q9Y6A4 193 aaKnown RBP5.27□□□□□ -1.57
SCFD1-214ENST00000554819 DTNBO60941 627 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 SCAF4O95104 1147 aaKnown RBP5.26□□□□□ -1.57
SCFD1-214ENST00000554819 ZRANB2O95218 330 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCFD1-214ENST00000554819 IL33O95760 270 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 ALAS1P13196 640 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 EDNRBP24530 442 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 PCSK1P29120 753 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 CTXN1P60606 82 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 RAP2BP61225 183 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 ATP8B2P98198 1209 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 NHLH2Q02577 135 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 LSM12Q3MHD2 195 aaKnown RBP5.26□□□□□ -1.57
SCFD1-214ENST00000554819 SEM1Q6ZVN7 128 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 TTC7BQ86TV6 843 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 RNF169Q8NCN4 708 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 NLGN4YQ8NFZ3 816 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-214ENST00000554819 CPT1CQ8TCG5 803 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 HOOK2Q96ED9 719 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 NUP88Q99567 741 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-214ENST00000554819 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 REXO4Q9GZR2 422 aaKnown RBP5.26□□□□□ -1.57
SCFD1-214ENST00000554819 MAN1C1Q9NR34 630 aa5.26□□□□□ -1.57
SCFD1-214ENST00000554819 PNPLA7Q6ZV29 1317 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 DRGXA6NNA5 263 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 GRXCR1A8MXD5 290 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 FAM20BO75063 409 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-214ENST00000554819 SPATA31D3P0C874 917 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 PDCP20941 246 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 FPR1P21462 350 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 AKAP5P24588 427 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 APOBEC3AP31941 199 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-214ENST00000554819 PTGS2P35354 604 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 EPHB1P54762 984 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 IL10RAQ13651 578 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 RAB39AQ14964 217 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 UBXN2BQ14CS0 331 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 CSRP2Q16527 193 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 C3orf36Q3SXR2 165 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 ZNF529Q6P280 563 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 CRIP3Q6Q6R5 217 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 SPATA31D4Q6ZUB0 917 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 USP51Q70EK9 711 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 PLXDC1Q8IUK5 500 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 ZNF276Q8N554 614 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 ZGPATQ8N5A5 531 aaKnown RBP5.25□□□□□ -1.57
SCFD1-214ENST00000554819 SLC25A43Q8WUT9 341 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-214ENST00000554819 TMX3Q96JJ7 454 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 CLPTM1LQ96KA5 538 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 SLC46A2Q9BY10 475 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 CALCOCO1Q9P1Z2 691 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 IP6K2Q9UHH9 426 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
SCFD1-214ENST00000554819 GAGE12BA1L429 117 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 GAGE12HA6NDE8 117 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 LEFTY2O00292 366 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 WNT10BO00744 389 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 FZD7O75084 574 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 TACR2P21452 398 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 DGCR2P98153 550 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 ZXDAP98168 799 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 MCL1Q07820 350 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms