RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CLUL1Q15846 466 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 ACAD10Q6JQN1 1059 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 ZKSCAN4Q969J2 545 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 HEMGNQ9BXL5 484 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 ANKEF1Q9NU02 776 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 PCYOX1Q9UHG3 505 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 VWA5AO00534 786 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 PODXLO00592 558 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 IFNAR2P48551 515 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 OTUD6AQ7L8S5 288 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 CCDC50Q8IVM0 306 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 GPD1LQ8N335 351 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 CEP89Q96ST8 783 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 DDX23Q9BUQ8 820 aaKnown RBP16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 PASKQ96RG2 1323 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 GOLGA6L7A0A1B0GV03 622 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 ECEL1O95672 775 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 HARSP12081 509 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 RRM1P23921 792 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 CCND2P30279 289 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 CIAPIN1Q6FI81 312 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 CCDC121Q6ZUS5 278 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 DDX1Q92499 740 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 TLCD1Q96CP7 247 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 SEC16BQ96JE7 1060 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 CCDC114Q96M63 670 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 CHST7Q9NS84 486 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 C1orf112Q9NSG2 853 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 MAPK13O15264 365 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 CPP00450 1065 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 SCP2P22307 547 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 WNT7BP56706 349 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 KRT17Q04695 432 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 CALCOCO2Q13137 446 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 NBPF12Q5TAG4 269 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 CCDC60Q8IWA6 550 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 TMEM143Q96AN5 459 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 TEPSINQ96N21 525 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 TIPINQ9BVW5 301 aa16.78■□□□□ 0.28
ARHGEF40-203ENST00000554514 LIG4P49917 911 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 CDR1P51861 262 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 PRKCEQ02156 737 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 SIX1Q15475 284 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 CLEC16AQ2KHT3 1053 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 SPATS2Q86XZ4 545 aaKnown RBP16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 MGARPQ8TDB4 240 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 ZNF516Q92618 1163 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 FNBP1Q96RU3 617 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 TAOK3Q9H2K8 898 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 UVRAGQ9P2Y5 699 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 PPP1R1BQ9UD71 204 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 USTQ9Y2C2 406 aa16.77■□□□□ 0.28
ARHGEF40-203ENST00000554514 FOXO6A8MYZ6 492 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 O00370 1275 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 GJB6O95452 261 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 CFHP08603 1231 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 NUDT17P0C025 328 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 KCNA3P22001 575 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 HMGCS2P54868 508 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 LONRF1Q17RB8 773 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 SPRED3Q2MJR0 410 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 SEZ6Q53EL9 994 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 MFSD14AQ96MC6 490 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 PWWP2AQ96N64 755 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 XPO6Q96QU8 1125 aaKnown RBP16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 HERPUD2Q9BSE4 406 aa16.77■□□□□ 0.27
ARHGEF40-203ENST00000554514 RIPK2O43353 540 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 GRIN3BO60391 1043 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 MTA2O94776 668 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 BYSLQ13895 437 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 CACNA2D3Q8IZS8 1091 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 MTMR14Q8NCE2 650 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 XPNPEP1Q9NQW7 623 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 ANKFY1Q9P2R3 1169 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 GGPS1O95749 300 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 NF2P35240 595 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 PIK3CAP42336 1068 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 DRG2P55039 364 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 TAS1R3Q7RTX0 852 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 USP37Q86T82 979 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 VSIG10LQ86VR7 867 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 ATP6V0A1Q93050 837 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 ZBTB45Q96K62 511 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 IFT74Q96LB3 600 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 C11orf70Q9BRQ4 267 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 PARP2Q9UGN5 583 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 COQ4Q9Y3A0 265 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 GJA3Q9Y6H8 435 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 DOCK5Q9H7D0 1870 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 RGS20O76081 388 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 HNRNPH1P31943 449 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 CHKAP35790 457 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 NLRP11P59045 1033 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 ZFYVE27Q5T4F4 411 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 TAX1BP1Q86VP1 789 aa16.76■□□□□ 0.27
ARHGEF40-203ENST00000554514 SLC17A8Q8NDX2 589 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms