RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 FBXL21Q9UKT6 434 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 TNFSF13BQ9Y275 285 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 PHLPP2Q6ZVD8 1323 aa20.63■□□□□ 0.89
CPSF2-203ENST00000554290 H0Y858 1186 aa20.63■□□□□ 0.89
CPSF2-203ENST00000554290 CENPBP07199 599 aaPredicted RBP20.63■□□□□ 0.89
CPSF2-203ENST00000554290 NAB2Q15742 525 aa20.63■□□□□ 0.89
CPSF2-203ENST00000554290 C8orf34Q49A92 452 aa20.63■□□□□ 0.89
CPSF2-203ENST00000554290 LNX1Q8TBB1 728 aaPredicted RBP20.63■□□□□ 0.89
CPSF2-203ENST00000554290 DRC1Q96MC2 740 aa20.63■□□□□ 0.89
CPSF2-203ENST00000554290 CLSTN3Q9BQT9 956 aa20.63■□□□□ 0.89
CPSF2-203ENST00000554290 CXCL16Q9H2A7 254 aa20.63■□□□□ 0.89
CPSF2-203ENST00000554290 RBM19Q9Y4C8 960 aaKnown RBP20.63■□□□□ 0.89
CPSF2-203ENST00000554290 E9PMD0 336 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 ST18O60284 1047 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 NPTX2P47972 431 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 YARSP54577 528 aaKnown RBP20.62■□□□□ 0.89
CPSF2-203ENST00000554290 PEX3P56589 373 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 DMP1Q13316 513 aaPredicted RBP20.62■□□□□ 0.89
CPSF2-203ENST00000554290 RABEP1Q15276 862 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 LIN9Q5TKA1 542 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 MCTP1Q6DN14 999 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 DCLRE1AQ6PJP8 1040 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.62■□□□□ 0.89
CPSF2-203ENST00000554290 FLCNQ8NFG4 579 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 UROC1Q96N76 676 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 MYADMQ96S97 322 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 TMEM134Q9H6X4 195 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 TOPORSQ9NS56 1045 aaPredicted RBP20.62■□□□□ 0.89
CPSF2-203ENST00000554290 FAM86C1Q9NVL1 165 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 PLXNA3P51805 1871 aa20.62■□□□□ 0.89
CPSF2-203ENST00000554290 TMEM189-UBE2V1I3L0A0 370 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 TRAPPC3O43617 180 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 HIP1RO75146 1068 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 B3GAT3O94766 335 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 HNRNPA1P09651 372 aaKnown RBP eCLIP20.61■□□□□ 0.89
CPSF2-203ENST00000554290 RILPL1Q5EBL4 403 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 PPP1R10Q96QC0 940 aaKnown RBP20.61■□□□□ 0.89
CPSF2-203ENST00000554290 ACO2Q99798 780 aaKnown RBP20.61■□□□□ 0.89
CPSF2-203ENST00000554290 TIPINQ9BVW5 301 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 CCDC94Q9BW85 323 aaPredicted RBP20.61■□□□□ 0.89
CPSF2-203ENST00000554290 MRPL4Q9BYD3 311 aaKnown RBP20.61■□□□□ 0.89
CPSF2-203ENST00000554290 C17orf75Q9HAS0 396 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.61■□□□□ 0.89
CPSF2-203ENST00000554290 FBXW11Q9UKB1 542 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 C2orf16Q68DN1 1984 aa20.61■□□□□ 0.89
CPSF2-203ENST00000554290 PP2D1A8MPX8 630 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 LAMP2P13473 410 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 CDC25AP30304 524 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 GRM5P41594 1212 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 GLRA4Q5JXX5 417 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 PPM1LQ5SGD2 360 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 RINT1Q6NUQ1 792 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 GET4Q7L5D6 327 aaPredicted RBP20.6■□□□□ 0.89
CPSF2-203ENST00000554290 SIX5Q8N196 739 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 SLC44A3Q8N4M1 653 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 RSAD2Q8WXG1 361 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 KMT5AQ9NQR1 393 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 WNT16Q9UBV4 365 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 KCNG1Q9UIX4 513 aa20.6■□□□□ 0.89
CPSF2-203ENST00000554290 ZFP37Q9Y6Q3 630 aaPredicted RBP20.6■□□□□ 0.89
CPSF2-203ENST00000554290 XYLBO75191 536 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 AOC1P19801 751 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 FGFR3P22607 806 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 FSHRP23945 695 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 HOXA9P31269 272 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 IL17AQ16552 155 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 ZNF568Q3ZCX4 644 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 C1orf186Q6ZWK4 172 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 DAW1Q8N136 415 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 KCTD17Q8N5Z5 321 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 RTP3Q9BQQ7 232 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 TCHPQ9BT92 498 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 SLC38A7Q9NVC3 462 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 ARHGAP28Q9P2N2 729 aa20.59■□□□□ 0.89
CPSF2-203ENST00000554290 SMIM28A0A1B0GU29 152 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 NARSO43776 548 aaKnown RBP20.58■□□□□ 0.89
CPSF2-203ENST00000554290 C8AP07357 584 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 CFHP08603 1231 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 OR1D2P34982 312 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 CLCNKBP51801 687 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 RAB33AQ14088 237 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 ZRSR1Q15695 479 aaKnown RBP20.58■□□□□ 0.89
CPSF2-203ENST00000554290 UPP1Q16831 310 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 UVSSAQ2YD98 709 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 GRASPQ7Z6J2 395 aaPredicted RBP20.58■□□□□ 0.89
CPSF2-203ENST00000554290 DDX27Q96GQ7 796 aaKnown RBP20.58■□□□□ 0.89
CPSF2-203ENST00000554290 MMTAG2Q9BU76 263 aaKnown RBP20.58■□□□□ 0.89
CPSF2-203ENST00000554290 RUSC1Q9BVN2 902 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 TARS2Q9BW92 718 aaKnown RBP20.58■□□□□ 0.89
CPSF2-203ENST00000554290 CDT1Q9H211 546 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 PTPRHQ9HD43 1115 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 MTRRQ9UBK8 725 aa20.58■□□□□ 0.89
CPSF2-203ENST00000554290 H3BQV1 296 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 STK25O00506 426 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 MCF2P10911 925 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 SRFP11831 508 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 NPR3P17342 541 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 GUCY2CP25092 1073 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 OSTNP61366 133 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 ATP2C1P98194 919 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms