RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TOPORSQ9NS56 1045 aaPredicted RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 CEP72Q9P209 647 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 MYO6Q9UM54 1294 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 CAPN11Q9UMQ6 739 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 DERAQ9Y315 318 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 LUC7L2Q9Y383 392 aaKnown RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 C2CD2Q9Y426 696 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 TTC26A0AVF1 554 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 PQBP1O60828 265 aaKnown RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 MFAP3LO75121 409 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 ZC3H11AO75152 810 aaKnown RBP eCLIP8.28□□□□□ -1.08
TDP1-209ENST00000554180 CXCL8P10145 99 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 GHRP10912 638 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 SKIP12755 728 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 ZSCAN20P17040 1043 aaPredicted RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 TNNI1P19237 187 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 PON1P27169 355 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 CASP14P31944 242 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 TNFSF9P41273 254 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 YARSP54577 528 aaKnown RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 ZBED6P86452 979 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 KCNMA1Q12791 1236 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 DUOXA2Q1HG44 320 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 UBXN11Q5T124 520 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 TWF2Q6IBS0 349 aaKnown RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 SV2AQ7L0J3 742 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 LRRC8DQ7L1W4 858 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 CDR2LQ86X02 465 aaPredicted RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 LRRC8AQ8IWT6 810 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 CEP120Q8N960 986 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 TC2NQ8N9U0 490 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 FBXL13Q8NEE6 735 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 CCDC112Q8NEF3 446 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 LMO3Q8TAP4 145 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 SNX27Q96L92 541 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 FAM81BQ96LP2 452 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 PCMTD1Q96MG8 357 aaPredicted RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 PANX2Q96RD6 677 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 DNAJC7Q99615 494 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 CRACR2AQ9BSW2 395 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 LSM14BQ9BX40 385 aaKnown RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 FTHL17Q9BXU8 183 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 MCOLN1Q9GZU1 580 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 GANQ9H2C0 597 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 C11orf49Q9H6J7 331 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 MMRN2Q9H8L6 949 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 AGO3Q9H9G7 860 aaKnown RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 FAM207AQ9NSI2 230 aaPredicted RBP8.28□□□□□ -1.08
TDP1-209ENST00000554180 PADI3Q9ULW8 664 aa8.28□□□□□ -1.08
TDP1-209ENST00000554180 ZNF623O75123 536 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 NOL4O94818 638 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 C4BPAP04003 597 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 TMEM191BP0C7N4 346 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 UCHL3P15374 230 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 FECHP22830 423 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 CD52P31358 61 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 HNRNPH3P31942 346 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 KLK7P49862 253 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 FXR1P51114 621 aaKnown RBP eCLIP8.27□□□□□ -1.09
TDP1-209ENST00000554180 OSTNP61366 133 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 TLE2Q04725 743 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 DSC3Q14574 896 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 MBTPS1Q14703 1052 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 PTPN21Q16825 1174 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 SLC10A6Q3KNW5 377 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 XKR4Q5GH76 650 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 KLHDC7AQ5VTJ3 777 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 TDRD10Q5VZ19 366 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 DPY19L2P1Q6NXN4 242 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 NECAB2Q7Z6G3 386 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 EHBP1Q8NDI1 1231 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 DIS3LQ8TF46 1054 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 CACTINQ8WUQ7 758 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 SYN2Q92777 582 aaPredicted RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 APBB2Q92870 758 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 FAXDC2Q96IV6 333 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 ANKRD36BP1Q96IX9 119 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 POP1Q99575 1024 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 NAA15Q9BXJ9 866 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 EIF2AQ9BY44 585 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 NXF3Q9H4D5 531 aaKnown RBP8.27□□□□□ -1.09
TDP1-209ENST00000554180 SIX2Q9NPC8 291 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 ABHD10Q9NUJ1 306 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 FAM105AQ9NUU6 356 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 RAB20Q9NX57 234 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 CNTN3Q9P232 1028 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 APEX2Q9UBZ4 518 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 TBX21Q9UL17 535 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 IPPQ9Y573 584 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 PTPRJQ12913 1337 aa8.27□□□□□ -1.09
TDP1-209ENST00000554180 DNAH12Q6ZR08 3092 aa8.26□□□□□ -1.09
TDP1-209ENST00000554180 A0A0U1RQF3 1178 aa8.26□□□□□ -1.09
TDP1-209ENST00000554180 LACTBL1A8MY62 500 aa8.26□□□□□ -1.09
TDP1-209ENST00000554180 EPHB6O15197 1021 aa8.26□□□□□ -1.09
TDP1-209ENST00000554180 MEFVO15553 781 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms