RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 PSMC2P35998 433 aaKnown RBP20.21■□□□□ 0.83
LRP1-204ENST00000553277 CLCN3P51790 818 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 IGBP1P78318 339 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 HIC1Q14526 733 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 IFI16Q16666 785 aaKnown RBP20.21■□□□□ 0.83
LRP1-204ENST00000553277 NFRKBQ6P4R8 1299 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 SPATA4Q8NEY3 305 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 FAM71BQ8TC56 605 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 KIFC3Q9BVG8 833 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 SALL4Q9UJQ4 1053 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 INTUQ9ULD6 942 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 EXOC7Q9UPT5 735 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 FRMPD3Q5JV73 1810 aa20.21■□□□□ 0.83
LRP1-204ENST00000553277 SMIM35A0A1B0GVV1 85 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 CLSTN1O94985 981 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 GNAT1P11488 350 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 JAM2P57087 298 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 CDC42EP1Q00587 391 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 HS2ST1Q7LGA3 356 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 KSR1Q8IVT5 923 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 METTL13Q8N6R0 699 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.2■□□□□ 0.821e-8■■■■■ 33.6
LRP1-204ENST00000553277 CCDC113Q9H0I3 377 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 PDE11AQ9HCR9 933 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 AGPAT3Q9NRZ7 376 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 NENFQ9UMX5 172 aa20.2■□□□□ 0.82
LRP1-204ENST00000553277 TRIP12Q14669 1992 aaPredicted RBP20.2■□□□□ 0.82
LRP1-204ENST00000553277 A0A087X0T9 212 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 MOXD2PA6NHM9 499 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 H3BQF6 201 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 POLR3GO15318 223 aaPredicted RBP20.19■□□□□ 0.82
LRP1-204ENST00000553277 FAM228BP0C875 321 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 PTENP60484 403 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 TFDP1Q14186 410 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 CFAP221Q4G0U5 840 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 TAF3Q5VWG9 929 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 DEPTORQ8TB45 409 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 SH3TC2Q8TF17 1288 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 COG1Q8WTW3 980 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 ZBTB10Q96DT7 871 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 SPAG5Q96R06 1193 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 C2orf40Q9H1Z8 148 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 CCDC66A2RUB6 948 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 LRRIQ4A6NIV6 560 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 MCCD1P59942 119 aaPredicted RBP20.19■□□□□ 0.82
LRP1-204ENST00000553277 NBPF20Q3BBV1 942 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 HSP90B2PQ58FF3 399 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 MEI1Q5TIA1 1274 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 CCDC181Q5TID7 509 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 CTU1Q7Z7A3 348 aaKnown RBP20.19■□□□□ 0.82
LRP1-204ENST00000553277 VPS36Q86VN1 386 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 C7orf31Q8N865 590 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 IFT122Q9HBG6 1241 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 SIX2Q9NPC8 291 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 GTF2IRD1Q9UHL9 959 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 STYXL1Q9Y6J8 313 aa20.19■□□□□ 0.82
LRP1-204ENST00000553277 GRIN2DO15399 1336 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 A0A0A6YYK5 440 aaPredicted RBP20.18■□□□□ 0.82
LRP1-204ENST00000553277 C17orf102A2RUQ5 167 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 K7ERI5 159 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 FERP16591 822 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 SLC9A1P19634 815 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 ACLYP53396 1101 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 RHPN2Q8IUC4 686 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 FAM186BQ8IYM0 893 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 SYCP3Q8IZU3 236 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 RNF149Q8NC42 400 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 ARRDC4Q8NCT1 418 aa20.18■□□□□ 0.82
LRP1-204ENST00000553277 RFX1P22670 979 aa20.17■□□□□ 0.82
LRP1-204ENST00000553277 PTK2Q05397 1052 aa20.17■□□□□ 0.82
LRP1-204ENST00000553277 PKN2Q16513 984 aaKnown RBP20.17■□□□□ 0.82
LRP1-204ENST00000553277 FAM187BQ17R55 369 aa20.17■□□□□ 0.82
LRP1-204ENST00000553277 ZNF410Q86VK4 478 aa20.17■□□□□ 0.82
LRP1-204ENST00000553277 AENQ8WTP8 325 aaKnown RBP20.17■□□□□ 0.82
LRP1-204ENST00000553277 UNC93B1Q9H1C4 597 aa20.17■□□□□ 0.82
LRP1-204ENST00000553277 IKZF4Q9H2S9 585 aa20.17■□□□□ 0.82
LRP1-204ENST00000553277 FZD8Q9H461 694 aa20.17■□□□□ 0.82
LRP1-204ENST00000553277 ADAMTS1Q9UHI8 967 aa20.17■□□□□ 0.82
LRP1-204ENST00000553277 LRRIQ3A6PVS8 624 aaPredicted RBP20.16■□□□□ 0.82
LRP1-204ENST00000553277 GJB1P08034 283 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 ADSSP30520 456 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 PTPN11Q06124 597 aaPredicted RBP20.16■□□□□ 0.82
LRP1-204ENST00000553277 C2orf54Q08AI8 447 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 TAF2Q6P1X5 1199 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 SLC39A4Q6P5W5 647 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 ZNF571Q7Z3V5 609 aaPredicted RBP20.16■□□□□ 0.82
LRP1-204ENST00000553277 RPAINQ86UA6 219 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 NME8Q8N427 588 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 VTI1AQ96AJ9 217 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.16■□□□□ 0.82
LRP1-204ENST00000553277 ADAM21Q9UKJ8 722 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 TREHO43280 583 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 PALMO75781 387 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 SRGAP2CP0DJJ0 459 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 CASP4P49662 377 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 CTCFP49711 727 aaPredicted RBP20.16■□□□□ 0.82
LRP1-204ENST00000553277 GPC3P51654 580 aa20.16■□□□□ 0.82
LRP1-204ENST00000553277 DCAF17Q5H9S7 520 aaPredicted RBP20.16■□□□□ 0.82
LRP1-204ENST00000553277 FBXO46Q6PJ61 603 aaPredicted RBP20.16■□□□□ 0.82
LRP1-204ENST00000553277 ZPBP2Q6X784 338 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms