RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 BACH2Q9BYV9 841 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 CSRNP2Q9H175 543 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 LMAN1LQ9HAT1 526 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 TRPV5Q9NQA5 729 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 DMXL2Q8TDJ6 3036 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 NBEAQ8NFP9 2946 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 AKAP13Q12802 2813 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 CHURC1-FNTBB4DL54 471 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 CHRNB1P11230 501 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 CXCL12P48061 93 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 FNTBP49356 437 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 RCAN1P53805 252 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 RAB33AQ14088 237 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PCBP1Q15365 356 aaKnown RBP eCLIP12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PSMD5Q16401 504 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 SLC5A9Q2M3M2 681 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 Q4G0T1 1027 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 AXDND1Q5T1B0 1012 aaPredicted RBP12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PLA2G4FQ68DD2 849 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 IL31Q6EBC2 164 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 NOTUMQ6P988 496 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 MAP4K3Q8IVH8 894 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 SLC7A14Q8TBB6 771 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PSPC1Q8WXF1 523 aaKnown RBP12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 ING5Q8WYH8 240 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 TMEM143Q96AN5 459 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 MCRS1Q96EZ8 462 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PAAF1Q9BRP4 392 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PCDHB8Q9UN66 801 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 PDCD11Q14690 1871 aaKnown RBP12.67□□□□□ -0.38
SUPT16H-202ENST00000552829 SF3B1O75533 1304 aaKnown RBP eCLIP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 CYP3A7-CYP3A51PA0A087WV96 503 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 K7ESF4 209 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 NRG2O14511 850 aaPredicted RBP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 ASAP2O43150 1006 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 TADA2AO75478 443 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 CYP3A7P24462 503 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 GNA11P29992 359 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 PSEN1P49768 467 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 PTENP60484 403 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 PSMC5P62195 406 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 GRIK3Q13003 919 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 SRSF5Q13243 272 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 HSP90AA2PQ14568 343 aaPredicted RBP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 AMHR2Q16671 573 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 FERMT3Q86UX7 667 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 SPEM1Q8N4L4 309 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 FAM160A2Q8N612 972 aaPredicted RBP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 ETNPPLQ8TBG4 499 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 CCDC12Q8WUD4 166 aaPredicted RBP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 NXF3Q9H4D5 531 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 CACNG4Q9UBN1 327 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 ZMIZ1Q9ULJ6 1067 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 POLIQ9UNA4 740 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 MRPS23Q9Y3D9 190 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 ARID2Q68CP9 1835 aa12.66□□□□□ -0.38
SUPT16H-202ENST00000552829 SETXQ7Z333 2677 aaKnown RBP12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 TRIP11Q15643 1979 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 GOLGA8AA7E2F4 631 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 GOLGA8BA8MQT2 603 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 EML1O00423 815 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 RHOP08100 348 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 ZNF806P0C7X5 589 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 CEBPBP17676 345 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 HOXA6P31267 233 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 POU5F1BQ06416 359 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 FAM171A1Q5VUB5 890 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 LONP2Q86WA8 852 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 EXOC8Q8IYI6 725 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 RNF149Q8NC42 400 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 BICD2Q8TD16 824 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 SLC7A3Q8WY07 619 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 FAM3CQ92520 227 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 CPB2Q96IY4 423 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 APOL6Q9BWW8 343 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 MFRPQ9BY79 579 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 ZNF334Q9HCZ1 680 aaPredicted RBP12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 RXFP3Q9NSD7 469 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 WASF3Q9UPY6 502 aa12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 RBM19Q9Y4C8 960 aaKnown RBP12.65□□□□□ -0.38
SUPT16H-202ENST00000552829 EML5Q05BV3 1969 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 C1QTNF9BB2RNN3 333 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 ERLIN2O94905 339 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 KCNK5O95279 499 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 C1QTNF9P0C862 333 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 ARF4P18085 180 aaPredicted RBP12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 AKAP5P24588 427 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 RFC5P40937 340 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 PTGDRQ13258 359 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 TUSC3Q13454 348 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 SF3A2Q15428 464 aaKnown RBP12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 WDR44Q5JSH3 913 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 PRSS36Q5K4E3 855 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms