RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 USP41Q3LFD5 358 aa20.79■□□□□ 0.92
DDX54-208ENST00000551344 TPRNQ4KMQ1 711 aa20.79■□□□□ 0.92
DDX54-208ENST00000551344 KIAA1841Q6NSI8 718 aa20.79■□□□□ 0.92
DDX54-208ENST00000551344 FUT10Q6P4F1 479 aa20.79■□□□□ 0.92
DDX54-208ENST00000551344 CEP120Q8N960 986 aa20.79■□□□□ 0.92
DDX54-208ENST00000551344 SLC22A17Q8WUG5 538 aa20.79■□□□□ 0.92
DDX54-208ENST00000551344 PPP1R10Q96QC0 940 aaKnown RBP20.79■□□□□ 0.92
DDX54-208ENST00000551344 GPR62Q9BZJ7 368 aa20.79■□□□□ 0.92
DDX54-208ENST00000551344 USP15Q9Y4E8 981 aaPredicted RBP20.79■□□□□ 0.92
DDX54-208ENST00000551344 SMIM28A0A1B0GU29 152 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 CASTOR2A6NHX0 329 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 KLRC2P26717 231 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 GLUD2P49448 558 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 OSTNP61366 133 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 GTF2BQ00403 316 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 NOLC1Q14978 699 aaKnown RBP eCLIP20.78■□□□□ 0.92
DDX54-208ENST00000551344 SUSD6Q92537 303 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 DDX12PQ92771 950 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 BICD1Q96G01 975 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 FIZ1Q96SL8 496 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 PAAF1Q9BRP4 392 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 PANK2Q9BZ23 570 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 ST6GALNAC4Q9H4F1 302 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 RXFP1Q9HBX9 757 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 SLC38A7Q9NVC3 462 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 DZANK1Q9NVP4 752 aa20.78■□□□□ 0.92
DDX54-208ENST00000551344 K7ENM7 598 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 C2CD2LO14523 706 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 CUTAO60888 179 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 PIGRP01833 764 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 STAT6P42226 847 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 ITIH3Q06033 890 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 ELAVL2Q12926 359 aaKnown RBP20.77■□□□□ 0.92
DDX54-208ENST00000551344 DCLRE1AQ6PJP8 1040 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 DYMQ7RTS9 669 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 RABGGTAQ92696 567 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 UROC1Q96N76 676 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.77■□□□□ 0.92
DDX54-208ENST00000551344 ANKFY1Q9P2R3 1169 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 SEL1LQ9UBV2 794 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 CFAP45Q9UL16 551 aa20.77■□□□□ 0.92
DDX54-208ENST00000551344 SF3B1O75533 1304 aaKnown RBP eCLIP20.77■□□□□ 0.911e-6■■■■■ 126.4
DDX54-208ENST00000551344 MYMKA6NI61 221 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 C1RP00736 705 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 KCNE1P15382 129 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 EPCAMP16422 314 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 LIG4P49917 911 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 CLCN4P51793 760 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 PKP1Q13835 747 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 KYAT1Q16773 422 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 GLRA4Q5JXX5 417 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 CES5AQ6NT32 575 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 ZNF720Q7Z2F6 126 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 KCNG4Q8TDN1 519 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 DDX27Q96GQ7 796 aaKnown RBP20.76■□□□□ 0.91
DDX54-208ENST00000551344 SNX27Q96L92 541 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 PHF7Q9BWX1 381 aaPredicted RBP20.76■□□□□ 0.91
DDX54-208ENST00000551344 ADAM7Q9H2U9 754 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 CACNG4Q9UBN1 327 aa20.76■□□□□ 0.91
DDX54-208ENST00000551344 A0A087X0B3 334 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 TMEM189-UBE2V1I3L0A0 370 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 HNRNPDLO14979 420 aaKnown RBP20.75■□□□□ 0.91
DDX54-208ENST00000551344 TEX28O15482 410 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 ADH1AP07327 375 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 CLTAP09496 248 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 HARSP12081 509 aaKnown RBP20.75■□□□□ 0.91
DDX54-208ENST00000551344 GAP43P17677 238 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 NMT1P30419 496 aaKnown RBP20.75■□□□□ 0.91
DDX54-208ENST00000551344 MATR3P43243 847 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDX54-208ENST00000551344 SLC10A6Q3KNW5 377 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 FOXD4L6Q3SYB3 417 aaPredicted RBP20.75■□□□□ 0.91
DDX54-208ENST00000551344 FOXD4L3Q6VB84 417 aaPredicted RBP20.75■□□□□ 0.91
DDX54-208ENST00000551344 DNAJC19Q96DA6 116 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 PLEKHA5Q9HAU0 1116 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 CNTN3Q9P232 1028 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 FNIP2Q9P278 1114 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 DPP7Q9UHL4 492 aa20.75■□□□□ 0.91
DDX54-208ENST00000551344 B3GAT3O94766 335 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 KIF4AO95239 1232 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 CREMQ03060 361 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 CBX2Q14781 532 aaPredicted RBP20.74■□□□□ 0.91
DDX54-208ENST00000551344 UPP1Q16831 310 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 FAM171A1Q5VUB5 890 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 MAP4K3Q8IVH8 894 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 PDILTQ8N807 584 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 RIN2Q8WYP3 895 aaPredicted RBP20.74■□□□□ 0.91
DDX54-208ENST00000551344 FBXL18Q96ME1 805 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 ZMAT2Q96NC0 199 aaKnown RBP20.74■□□□□ 0.91
DDX54-208ENST00000551344 NECTIN4Q96NY8 510 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 TTPALQ9BTX7 342 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 LRRC27Q9C0I9 530 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 HAPLN2Q9GZV7 340 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 CUEDC2Q9H467 287 aa20.74■□□□□ 0.91
DDX54-208ENST00000551344 PI4K2BG5E9Z4 385 aa20.73■□□□□ 0.91
DDX54-208ENST00000551344 TRAPPC3O43617 180 aa20.73■□□□□ 0.91
DDX54-208ENST00000551344 RPL9P32969 192 aaKnown RBP20.73■□□□□ 0.91
DDX54-208ENST00000551344 CLCNKBP51801 687 aa20.73■□□□□ 0.91
DDX54-208ENST00000551344 AXDND1Q5T1B0 1012 aaPredicted RBP20.73■□□□□ 0.91
DDX54-208ENST00000551344 SHC4Q6S5L8 630 aa20.73■□□□□ 0.91
DDX54-208ENST00000551344 SFR1Q86XK3 245 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms