RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	SERHL2	Q9H4I8	314 aa		6.29	□□□□□ -1.4
CNOT2-222	ENST00000550155	TMEM140	Q9NV12	185 aa		6.29	□□□□□ -1.4
CNOT2-222	ENST00000550155	ANKFY1	Q9P2R3	1169 aa		6.29	□□□□□ -1.4
CNOT2-222	ENST00000550155	MCM8	Q9UJA3	840 aa		6.29	□□□□□ -1.4
CNOT2-222	ENST00000550155	ZNF185	O15231	689 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	TEX33	O43247	280 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	PRKD3	O94806	890 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	ALOX15	P16050	662 aa	Predicted RBP	6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	ATP5J	P18859	108 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	ZFP36	P26651	326 aa	Known RBP	6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	SREBF1	P36956	1147 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	MCAM	P43121	646 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	GPR3	P46089	330 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	BEAN1	Q3B7T3	259 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	FAM102A	Q5T9C2	384 aa	Predicted RBP	6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	LHFPL2	Q6ZUX7	228 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	FBXO18	Q8NFZ0	1043 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	CYFIP2	Q96F07	1278 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	CRAMP1	Q96RY5	1269 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	MRI1	Q9BV20	369 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	WDR11	Q9BZH6	1224 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	CCM2L	Q9NUG4	571 aa	Predicted RBP	6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	SCOC	Q9UIL1	159 aa		6.28	□□□□□ -1.4
CNOT2-222	ENST00000550155	FAM171A2	A8MVW0	826 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	POMC	P01189	267 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	BMP5	P22003	454 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	ZEB1	P37275	1124 aa	Predicted RBP	6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	NANOS3	P60323	173 aa	Known RBP	6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	KRTAP15-1	Q3LI76	137 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	HECTD2	Q5U5R9	776 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	AFMID	Q63HM1	303 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	PCSK4	Q6UW60	755 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	MED25	Q71SY5	747 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	STON2	Q8WXE9	905 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	TEX101	Q9BY14	249 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	TOR3A	Q9H497	397 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	DMRT3	Q9NQL9	472 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	RNF181	Q9P0P0	153 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	DNM3	Q9UQ16	869 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	PCDHGA2	Q9Y5H1	932 aa		6.27	□□□□□ -1.41
CNOT2-222	ENST00000550155	OSM	P13725	252 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	BLOC1S1	P78537	153 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	REST	Q13127	1097 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	AGAP9	Q5VTM2	703 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	TSHZ3	Q63HK5	1081 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	RHOT2	Q8IXI1	618 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	CMTR2	Q8IYT2	770 aa	Known RBP	6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	OR56A1	Q8NGH5	318 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	COG1	Q8WTW3	980 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	CAVIN3	Q969G5	261 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	AJAP1	Q9UKB5	411 aa	Predicted RBP	6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	NOX1	Q9Y5S8	564 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	GPR45	Q9Y5Y3	372 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	ATRNL1	Q5VV63	1379 aa		6.26	□□□□□ -1.41
CNOT2-222	ENST00000550155	GRID2IP	A4D2P6	1211 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	UNC119B	A6NIH7	251 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	NUDT3	O95989	172 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	FOS	P01100	380 aa	Predicted RBP	6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	MTNR1B	P49286	362 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	PPP3CA	Q08209	521 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	CLUL1	Q15846	466 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	EGFLAM	Q63HQ2	1017 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	CASKIN2	Q8WXE0	1202 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	FUBP3	Q96I24	572 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	LDAH	Q9H6V9	325 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	MANSC1	Q9H8J5	431 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	SPC25	Q9HBM1	224 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	SAP30BP	Q9UHR5	308 aa	Known RBP	6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	ZNHIT2	Q9UHR6	403 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	MAP3K2	Q9Y2U5	619 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	COL4A3	Q01955	1670 aa		6.25	□□□□□ -1.41
CNOT2-222	ENST00000550155	LMNA	P02545	664 aa	Known RBP	6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	CFI	P05156	583 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	HKR1	P10072	659 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	PROZ	P22891	400 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	MGAT2	Q10469	447 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	KLF1	Q13351	362 aa	Predicted RBP	6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	UBXN2B	Q14CS0	331 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	ATP2B3	Q16720	1220 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	ABHD17B	Q5VST6	288 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	OTUD7B	Q6GQQ9	843 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	MAPKAPK5	Q8IW41	473 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	BEND2	Q8NDZ0	799 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	GPR150	Q8NGU9	434 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	SSH1	Q8WYL5	1049 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	COQ10A	Q96MF6	247 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	C7orf25	Q9BPX7	421 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	PUS7L	Q9H0K6	701 aa	Known RBP	6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	RNPEP	Q9H4A4	650 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	RIOX1	Q9H6W3	641 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	SLC5A4	Q9NY91	659 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	PNPLA7	Q6ZV29	1317 aa		6.24	□□□□□ -1.41
CNOT2-222	ENST00000550155	PIPSL	A2A3N6	862 aa		6.23	□□□□□ -1.41
CNOT2-222	ENST00000550155	GPR32	O75388	356 aa		6.23	□□□□□ -1.41
CNOT2-222	ENST00000550155	CDKL5	O76039	1030 aa		6.23	□□□□□ -1.41
CNOT2-222	ENST00000550155	ALAS1	P13196	640 aa		6.23	□□□□□ -1.41
CNOT2-222	ENST00000550155	GUCY1A2	P33402	732 aa		6.23	□□□□□ -1.41
CNOT2-222	ENST00000550155	ALDH1A3	P47895	512 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms