RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 RSPO2Q6UXX9 243 aaPredicted RBP17.5■□□□□ 0.39
COX6A1-203ENST00000550009 USP49Q70CQ1 688 aa17.5■□□□□ 0.39
COX6A1-203ENST00000550009 PPFIBP1Q86W92 1011 aa17.5■□□□□ 0.39
COX6A1-203ENST00000550009 CEP57Q86XR8 500 aa17.5■□□□□ 0.39
COX6A1-203ENST00000550009 PRSS33Q8NF86 280 aa17.5■□□□□ 0.39
COX6A1-203ENST00000550009 RIPOR3Q96MK2 946 aa17.5■□□□□ 0.39
COX6A1-203ENST00000550009 CLSTN3Q9BQT9 956 aa17.5■□□□□ 0.39
COX6A1-203ENST00000550009 KMT5AQ9NQR1 393 aa17.5■□□□□ 0.39
COX6A1-203ENST00000550009 TNFSF13BQ9Y275 285 aa17.5■□□□□ 0.39
COX6A1-203ENST00000550009 PHLPP2Q6ZVD8 1323 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 GLUD1P00367 558 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 ADH1AP07327 375 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 PLA2G4BP0C869 781 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 BRCC3P46736 316 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 EFNA5P52803 228 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 CUL4AQ13619 759 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 USP41Q3LFD5 358 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 LILRA6Q6PI73 481 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 SYT2Q8N9I0 419 aaPredicted RBP17.49■□□□□ 0.39
COX6A1-203ENST00000550009 TDRD5Q8NAT2 981 aaKnown RBP17.49■□□□□ 0.39
COX6A1-203ENST00000550009 LNX1Q8TBB1 728 aaPredicted RBP17.49■□□□□ 0.39
COX6A1-203ENST00000550009 RSAD2Q8WXG1 361 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 C18orf25Q96B23 403 aaPredicted RBP17.49■□□□□ 0.39
COX6A1-203ENST00000550009 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 ADPGKQ9BRR6 497 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 RAB34Q9BZG1 259 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 BLOC1S4Q9NUP1 217 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 NR2E1Q9Y466 385 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 DMDP11532 3685 aa17.49■□□□□ 0.39
COX6A1-203ENST00000550009 SCN1AP35498 2009 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 CARNS1A5YM72 827 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 PROZP22891 400 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 NTHL1P78549 312 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 SIGLEC14Q08ET2 396 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 DMP1Q13316 513 aaPredicted RBP17.48■□□□□ 0.39
COX6A1-203ENST00000550009 KARSQ15046 597 aaKnown RBP17.48■□□□□ 0.39
COX6A1-203ENST00000550009 DCAF4L1Q3SXM0 396 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 ZNF568Q3ZCX4 644 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 ALKAL1Q6UXT8 129 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 TMEM161BQ8NDZ6 487 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 MYADMQ96S97 322 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 TMEM134Q9H6X4 195 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
COX6A1-203ENST00000550009 ZMYM2Q9UBW7 1377 aa17.48■□□□□ 0.39
COX6A1-203ENST00000550009 SMIM28A0A1B0GU29 152 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
COX6A1-203ENST00000550009 NR1I2O75469 434 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 GUCY2CP25092 1073 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 TKTP29401 623 aaKnown RBP17.47■□□□□ 0.39
COX6A1-203ENST00000550009 GRM5P41594 1212 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 SPAG1Q07617 926 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 MCM6Q14566 821 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 SF3A1Q15459 793 aaKnown RBP17.47■□□□□ 0.39
COX6A1-203ENST00000550009 IKZF4Q9H2S9 585 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 KIF3AQ9Y496 699 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 TCHHQ07283 1943 aa17.47■□□□□ 0.39
COX6A1-203ENST00000550009 SF3B1O75533 1304 aaKnown RBP eCLIP17.47■□□□□ 0.39
COX6A1-203ENST00000550009 NARSO43776 548 aaKnown RBP17.46■□□□□ 0.39
COX6A1-203ENST00000550009 MAPTP10636 758 aaKnown RBP17.46■□□□□ 0.39
COX6A1-203ENST00000550009 PLCG1P19174 1290 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 PSMD5Q16401 504 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 UPP1Q16831 310 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 ZBTB41Q5SVQ8 909 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 BMP8AQ7Z5Y6 402 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 ZDHHC14Q8IZN3 488 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 SMG7Q92540 1137 aaKnown RBP17.46■□□□□ 0.39
COX6A1-203ENST00000550009 DRC1Q96MC2 740 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 REEP2Q9BRK0 252 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 TTPALQ9BTX7 342 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 MRPL4Q9BYD3 311 aaKnown RBP17.46■□□□□ 0.39
COX6A1-203ENST00000550009 NT5C3AQ9H0P0 336 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 FNIP2Q9P278 1114 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 ANKFY1Q9P2R3 1169 aa17.46■□□□□ 0.39
COX6A1-203ENST00000550009 B3GAT3O94766 335 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 PLS3P13797 630 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 MARCKSP29966 332 aaPredicted RBP17.45■□□□□ 0.38
COX6A1-203ENST00000550009 TNFSF9P41273 254 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 MCM2P49736 904 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 NHLH1Q02575 133 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 PTPAQ15257 358 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 XKR4Q5GH76 650 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 ARL6IP4Q66PJ3 421 aaKnown RBP17.45■□□□□ 0.38
COX6A1-203ENST00000550009 CCDC149Q6ZUS6 474 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 GPBP1Q86WP2 473 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 FBXL6Q8N531 539 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 EPSTI1Q96J88 318 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 SNX27Q96L92 541 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 CLIC6Q96NY7 704 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 NTPCRQ9BSD7 190 aaKnown RBP17.45■□□□□ 0.38
COX6A1-203ENST00000550009 BACH2Q9BYV9 841 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 SORCS3Q9UPU3 1222 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.45■□□□□ 0.38
COX6A1-203ENST00000550009 STK24Q9Y6E0 443 aa17.45■□□□□ 0.38
COX6A1-203ENST00000550009 TSC2P49815 1807 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 CFAP54Q96N23 3096 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
COX6A1-203ENST00000550009 GUCY2FP51841 1108 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 CEBPZQ03701 1054 aaKnown RBP17.44■□□□□ 0.38
COX6A1-203ENST00000550009 TCF15Q12870 199 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms