RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 CXADRP78310 365 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 PREPLQ4J6C6 727 aaPredicted RBP11.88□□□□□ -0.51
TROAP-209ENST00000549275 PRSS36Q5K4E3 855 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 SPDYCQ5MJ68 293 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 PEAR1Q5VY43 1037 aaPredicted RBP11.88□□□□□ -0.51
TROAP-209ENST00000549275 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 FUT10Q6P4F1 479 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 SYT13Q7L8C5 426 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 RABEPKQ7Z6M1 372 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 NAXDQ8IW45 347 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 MINDY1Q8N5J2 469 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 LIN37Q96GY3 246 aaPredicted RBP11.88□□□□□ -0.51
TROAP-209ENST00000549275 TMEM209Q96SK2 561 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 CEP131Q9UPN4 1083 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 EML5Q05BV3 1969 aa11.88□□□□□ -0.51
TROAP-209ENST00000549275 TERTO14746 1132 aaKnown RBP11.87□□□□□ -0.51
TROAP-209ENST00000549275 POMCP01189 267 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 PCP11498 1178 aaKnown RBP11.87□□□□□ -0.51
TROAP-209ENST00000549275 CR2P20023 1033 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 GPC3P51654 580 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 CDC42EP1Q00587 391 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 GRSF1Q12849 480 aaKnown RBP eCLIP11.87□□□□□ -0.51
TROAP-209ENST00000549275 LY6DQ14210 128 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 PTPAQ15257 358 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 DUOXA1Q1HG43 343 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 LPCAT2Q7L5N7 544 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 HAUS6Q7Z4H7 955 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 MRPL10Q7Z7H8 261 aaKnown RBP11.87□□□□□ -0.51
TROAP-209ENST00000549275 FAM9BQ8IZU0 186 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
TROAP-209ENST00000549275 NXPE2Q96DL1 559 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 B3GALT6Q96L58 329 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 GAD1Q99259 594 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 CLSTN3Q9BQT9 956 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 GPR62Q9BZJ7 368 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 UBN1Q9NPG3 1134 aa11.87□□□□□ -0.51
TROAP-209ENST00000549275 HEMK1Q9Y5R4 338 aaPredicted RBP11.87□□□□□ -0.51
TROAP-209ENST00000549275 NFASCO94856 1347 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 NOTCH4Q99466 2003 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 HEPACAM2A8MVW5 462 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 CFIP05156 583 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 SYPP08247 313 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 SERPINF2P08697 491 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 FGFR4P22455 802 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 SFPQP23246 707 aaKnown RBP eCLIP11.86□□□□□ -0.51
TROAP-209ENST00000549275 VIPR2P41587 438 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 NT5C2P49902 561 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 DGKEP52429 567 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 DSC1Q08554 894 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 SPIRE1Q08AE8 756 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 CEP85Q6P2H3 762 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 SCLT1Q96NL6 688 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 SDF4Q9BRK5 362 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 GPR88Q9GZN0 384 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 TMEM74BQ9NUR3 256 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 PKD2L1Q9P0L9 805 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 SEPT3Q9UH03 358 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 UBIAD1Q9Y5Z9 338 aa11.86□□□□□ -0.51
TROAP-209ENST00000549275 ATG2BQ96BY7 2078 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
TROAP-209ENST00000549275 TLX3O43711 291 aaPredicted RBP11.85□□□□□ -0.51
TROAP-209ENST00000549275 CBFA2T3O75081 653 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 BCKDHBP21953 392 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 CLCN3P51790 818 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 AFF1P51825 1210 aaKnown RBP11.85□□□□□ -0.51
TROAP-209ENST00000549275 TLE3Q04726 772 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 RAB33AQ14088 237 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 TMEM196Q5HYL7 178 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 PRSS55Q6UWB4 352 aaPredicted RBP11.85□□□□□ -0.51
TROAP-209ENST00000549275 LINC01465Q8N7H1 131 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 ACDQ96AP0 544 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 GCOM2Q9BZD3 368 aaPredicted RBP11.85□□□□□ -0.51
TROAP-209ENST00000549275 FAM117AQ9C073 453 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 INO80BQ9C086 356 aaPredicted RBP11.85□□□□□ -0.51
TROAP-209ENST00000549275 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 CAPN10Q9HC96 672 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 PILRBQ9UKJ0 227 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 PIN4Q9Y237 131 aaKnown RBP11.85□□□□□ -0.51
TROAP-209ENST00000549275 PCDHB2Q9Y5E7 798 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 MGAQ8IWI9 3026 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 PTPRBP23467 1997 aa11.85□□□□□ -0.51
TROAP-209ENST00000549275 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
TROAP-209ENST00000549275 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 GJB3O75712 270 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 POU3F2P20265 443 aaPredicted RBP11.84□□□□□ -0.51
TROAP-209ENST00000549275 GRM4Q14833 912 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 FBXO43Q4G163 708 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 RTP2Q5QGT7 225 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 LMBRD2Q68DH5 695 aaPredicted RBP11.84□□□□□ -0.51
TROAP-209ENST00000549275 EFCAB12Q6NXP0 572 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
TROAP-209ENST00000549275 TMC8Q8IU68 726 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 TRMT2AQ8IZ69 625 aaKnown RBP11.84□□□□□ -0.51
TROAP-209ENST00000549275 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
TROAP-209ENST00000549275 SMARCC2Q8TAQ2 1214 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 LNX1Q8TBB1 728 aaPredicted RBP11.84□□□□□ -0.51
TROAP-209ENST00000549275 ZSCAN18Q8TBC5 510 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms