RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 EAF2Q96CJ1 260 aaPredicted RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 FUBP3Q96I24 572 aaKnown RBP eCLIP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 TMX3Q96JJ7 454 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 SCYL1Q96KG9 808 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 FAM227BQ96M60 508 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 TCEANC2Q96MN5 208 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 TTC14Q96N46 770 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 GBP4Q96PP9 640 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 SYT3Q9BQG1 590 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 SPATA25Q9BR10 227 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 UPF3BQ9BZI7 483 aaKnown RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 CDH19Q9H159 772 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PNNQ9H307 717 aaKnown RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 GRPEL1Q9HAV7 217 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 AASDHPPTQ9NRN7 309 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 USP40Q9NVE5 1235 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 DTLQ9NZJ0 730 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 ZIM2Q9NZV7 527 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 BTBD7Q9P203 1132 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 MSRAQ9UJ68 235 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 WASF3Q9UPY6 502 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 NOC2LQ9Y3T9 749 aaKnown RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 NUB1Q9Y5A7 615 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PCDHGA9Q9Y5G4 932 aaKnown RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PCDHGA8Q9Y5G5 932 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PCDHGA7Q9Y5G6 932 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PCDHGA6Q9Y5G7 932 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PCDHGA3Q9Y5H0 932 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PCDHGA2Q9Y5H1 932 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 SNX14Q9Y5W7 946 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 COL4A1P02462 1669 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 CAMTA1Q9Y6Y1 1673 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PTPRCP08575 1304 aa2.84□□□□□ -1.96
DEPDC4-206ENST00000549100 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.84□□□□□ -1.96
DEPDC4-206ENST00000549100 SLIT3O75094 1523 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 MEGF6O75095 1541 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ALS2Q96Q42 1657 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 SCN11AQ9UI33 1791 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 GOLGA8AA7E2F4 631 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 GOLGA8BA8MQT2 603 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 PRPF3O43395 683 aaKnown RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 SURF6O75683 361 aaKnown RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ABLIM3O94929 683 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ZBTB7AO95365 584 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 MPIG6BO95866 241 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 PRLP01236 227 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 GCP02774 474 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 GNAI2P04899 355 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 HSP90AB1P08238 724 aaKnown RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 RBP3P10745 1247 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 CD40P25942 277 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 HSPA4P34932 840 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 MC3RP41968 323 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 HERVK_113P62684 666 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 YBX1P67809 324 aaKnown RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ZNF200P98182 395 aaPredicted RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 LMOD3Q0VAK6 560 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 DBPQ10586 325 aaPredicted RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 FAPQ12884 760 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 AIMP1Q12904 312 aaKnown RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 MOGSQ13724 837 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 SLC9A5Q14940 896 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 PPP2R5AQ15172 486 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 CR1LQ2VPA4 569 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 CD276Q5ZPR3 534 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 FAM173BQ6P4H8 233 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ZNF530Q6P9A1 599 aaPredicted RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ZC3H14Q6PJT7 736 aaKnown RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 TEPPQ6URK8 271 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 CCDC129Q6ZRS4 1044 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 FRMD7Q6ZUT3 714 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 KRT28Q7Z3Y7 464 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 TMC6Q7Z403 805 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 CXorf67Q86X51 503 aaPredicted RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ZZZ3Q8IYH5 903 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 SYNE4Q8N205 404 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 FAM43AQ8N2R8 423 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 NECAB1Q8N987 351 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ALG3Q92685 438 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 DVL3Q92997 716 aaPredicted RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 IL17RAQ96F46 866 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 FAXDC2Q96IV6 333 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 SAMD11Q96NU1 681 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 SEC62Q99442 399 aaKnown RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 RHOBTB2Q9BYZ6 727 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 SLC13A1Q9BZW2 595 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 POFUT1Q9H488 388 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 PRDM12Q9H4Q4 367 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 SLC39A2Q9NP94 309 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 CCM2LQ9NUG4 571 aaPredicted RBP2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 UCKL1Q9NWZ5 548 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 TCEAL9Q9UHQ7 104 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 ST6GALNAC2Q9UJ37 374 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 DENND2AQ9ULE3 1009 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 FAN1Q9Y2M0 1017 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 MAP3K2Q9Y2U5 619 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 PPP2R3BQ9Y5P8 575 aa2.83□□□□□ -1.96
DEPDC4-206ENST00000549100 LAMA4Q16363 1823 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms