RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 HEATR3Q7Z4Q2 680 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 C11orf96Q7Z7L8 435 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 GPR135Q8IZ08 494 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 LGI4Q8N135 537 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 SAMD3Q8N6K7 520 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 DCBLD1Q8N8Z6 715 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 NEIL1Q96FI4 390 aaPredicted RBP5.18□□□□□ -1.58
PTCH1-216ENST00000548379 CEP95Q96GE4 821 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 TMX3Q96JJ7 454 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 UHRF1Q96T88 793 aaPredicted RBP5.18□□□□□ -1.58
PTCH1-216ENST00000548379 CDC5LQ99459 802 aaKnown RBP5.18□□□□□ -1.58
PTCH1-216ENST00000548379 VRK1Q99986 396 aaPredicted RBP5.18□□□□□ -1.58
PTCH1-216ENST00000548379 MEGF9Q9H1U4 602 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 ATP6V0A4Q9HBG4 840 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 LMBRD1Q9NUN5 540 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 TMEM140Q9NV12 185 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 PUF60Q9UHX1 559 aaKnown RBP5.18□□□□□ -1.58
PTCH1-216ENST00000548379 KIF21AQ7Z4S6 1674 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 ZMYM3Q14202 1370 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 GOLIM4O00461 696 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 TRIM13O60858 407 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 GZMKP49863 264 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 CACNB3P54284 484 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 ZNF280AP59817 542 aaPredicted RBP5.17□□□□□ -1.58
PTCH1-216ENST00000548379 RAC3P60763 192 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 PPP2CBP62714 309 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 PPP2CAP67775 309 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 APBA1Q02410 837 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 HDAC1Q13547 482 aaPredicted RBP5.17□□□□□ -1.58
PTCH1-216ENST00000548379 PLS1Q14651 629 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 CNN3Q15417 329 aaKnown RBP5.17□□□□□ -1.58
PTCH1-216ENST00000548379 ZNF568Q3ZCX4 644 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 DACT2Q5SW24 774 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 NT5DC1Q5TFE4 455 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 KRT40Q6A162 431 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 DARS2Q6PI48 645 aaKnown RBP5.17□□□□□ -1.58
PTCH1-216ENST00000548379 CCDC149Q6ZUS6 474 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 SEM1Q6ZVN7 128 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 PDZD4Q76G19 769 aaPredicted RBP5.17□□□□□ -1.58
PTCH1-216ENST00000548379 FRMD5Q7Z6J6 570 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 PLEKHH3Q7Z736 793 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 DAAM2Q86T65 1068 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 RSPH3Q86UC2 560 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 COL23A1Q86Y22 540 aaPredicted RBP5.17□□□□□ -1.58
PTCH1-216ENST00000548379 FAM90A1Q86YD7 464 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 PLXDC1Q8IUK5 500 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 SP8Q8IXZ3 490 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 KRT78Q8N1N4 520 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 SHCBP1Q8NEM2 672 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 MDM1Q8TC05 714 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 PMM1Q92871 262 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 IL17RAQ96F46 866 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 C22orf23Q9BZE7 217 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 SENP6Q9GZR1 1112 aaPredicted RBP5.17□□□□□ -1.58
PTCH1-216ENST00000548379 WDCPQ9H6R7 721 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 FAM30AQ9NZY2 134 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 USP25Q9UHP3 1055 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 OAZ3Q9UMX2 235 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 PCDHA3Q9Y5H8 950 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 ACTL7AQ9Y615 435 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 IFT140Q96RY7 1462 aa5.17□□□□□ -1.58
PTCH1-216ENST00000548379 UBE2QL1A1L167 161 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 PMM2O15305 246 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 TEX33O43247 280 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 PEX14O75381 377 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 SASH1O94885 1247 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 CR2P20023 1033 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 PTPN7P35236 360 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 ALDH1A3P47895 512 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 NPEPPSP55786 919 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 SURF1Q15526 300 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 KIAA0753Q2KHM9 967 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 RNF220Q5VTB9 566 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 AFMIDQ63HM1 303 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 APOA5Q6Q788 366 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 OR5M3Q8NGP4 307 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 ANKS1AQ92625 1134 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 SLC35A4Q96G79 324 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 TOX2Q96NM4 488 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 STRBPQ96SI9 672 aaKnown RBP5.16□□□□□ -1.58
PTCH1-216ENST00000548379 DPYSL5Q9BPU6 564 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 NAA15Q9BXJ9 866 aaKnown RBP5.16□□□□□ -1.58
PTCH1-216ENST00000548379 NELFAQ9H3P2 528 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 PNPOQ9NVS9 261 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 MOCS1Q9NZB8 636 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 SLC23A1Q9UHI7 598 aa5.16□□□□□ -1.58
PTCH1-216ENST00000548379 URB2Q14146 1524 aaKnown RBP5.15□□□□□ -1.58
PTCH1-216ENST00000548379 CXorf49A8MYA2 514 aaPredicted RBP5.15□□□□□ -1.59
PTCH1-216ENST00000548379 F2RL2O00254 374 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 PJA2O43164 708 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 HOXA3O43365 443 aaPredicted RBP5.15□□□□□ -1.59
PTCH1-216ENST00000548379 STC2O76061 302 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 PRDX5P30044 214 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 TM4SF4P48230 202 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 NEK3P51956 506 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 PICALMQ13492 652 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 FGL2Q14314 439 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 FLYWCH1Q4VC44 716 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 IL31Q6EBC2 164 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms