RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 RTEL1-TNFRSF6BF6WH68 1400 aa3.53□□□□□ -1.85
DEPDC4-204ENST00000547823 AATKQ6ZMQ8 1374 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 DHX29Q7Z478 1369 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 PNPLA6Q8IY17 1366 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 MROH1Q8NDA8 1641 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 TCRBV16S1A1N1A0A5B0 115 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 KIF3BO15066 747 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 OPHN1O60890 802 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 PROP1O75360 226 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 ZFPL1O95159 310 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 GAAP10253 952 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 ZSCAN20P17040 1043 aaPredicted RBP3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 GZMKP49863 264 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 MYBPC3Q14896 1274 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 FAM214AQ32MH5 1076 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 KIAA1841Q6NSI8 718 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 BRINP3Q76B58 766 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 LRP10Q7Z4F1 713 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 CHST14Q8NCH0 376 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 PPP1R14CQ8TAE6 165 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 SCARB1Q8WTV0 552 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 BRIP1Q9BX63 1249 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 CPEB1Q9BZB8 566 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 PFDN2Q9UHV9 154 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 MARF1Q9Y4F3 1742 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 CAMSAP2Q08AD1 1489 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 PLEKHH2Q8IVE3 1493 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 KIAA1107Q9UPP5 1409 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 NCOA3Q9Y6Q9 1424 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 PIK3C2BO00750 1634 aa3.52□□□□□ -1.85
DEPDC4-204ENST00000547823 ASXL1Q8IXJ9 1541 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 CEP152O94986 1710 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 FAM83GA6ND36 823 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 B5MCH6 92 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 NRP2O60462 931 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 KRT37O76014 449 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 STK10O94804 968 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 FAM153BP0C7A2 387 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 RBP3P10745 1247 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 MECP2P51608 486 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 FAM189BP81408 668 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 DUSP2Q05923 314 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 FOXF2Q12947 444 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 FOXI1Q12951 378 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 CCDC178Q5BJE1 867 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 CPEB3Q8NE35 698 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 LRRC59Q96AG4 307 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 NOL10Q9BSC4 688 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 CABP5Q9NP86 173 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 SIRPGQ9P1W8 387 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 TESQ9UGI8 421 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 TNS2Q63HR2 1409 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 TMEM2Q9UHN6 1383 aa3.51□□□□□ -1.85
DEPDC4-204ENST00000547823 RGPD1P0DJD0 1748 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 MAST3O60307 1309 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 ARHGAP35Q9NRY4 1499 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 EGR2P11161 476 aaPredicted RBP3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 ATF3P18847 181 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 GPR15P49685 360 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 PIK3R6Q5UE93 754 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 KIAA1614Q5VZ46 1190 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 GPRIN1Q7Z2K8 1008 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 KIAA1958Q8N8K9 716 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 CDYL2Q8N8U2 506 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 ZSWIM2Q8NEG5 633 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 LSM14BQ9BX40 385 aaKnown RBP3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 C1QTNF7Q9BXJ2 289 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 KRTAP1-5Q9BYS1 174 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 TANGO6Q9C0B7 1094 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 SPON1Q9HCB6 807 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 KIAA1586Q9HCI6 787 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 ING3Q9NXR8 418 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 RNF181Q9P0P0 153 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 FPGT-TNNI3KV9GXZ4 949 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 PTCH1Q13635 1447 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 FMN1Q68DA7 1419 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 GLI3P10071 1580 aa3.5□□□□□ -1.85
DEPDC4-204ENST00000547823 KDM2BQ8NHM5 1336 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 MARCH11A6NNE9 402 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 RBMXL2O75526 392 aaKnown RBP3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 FOSP01100 380 aaPredicted RBP3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 IGLV2-14P01704 120 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 HOXB6P17509 224 aaKnown RBP3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 FDXRP22570 491 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 XPAP23025 273 aaPredicted RBP3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 RNASE9P60153 205 aaKnown RBP3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 NHLH2Q02577 135 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 DNAJC5GQ8N7S2 189 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 C9orf106Q8NAJ2 232 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 OR10H5Q8NGA6 315 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 SCLYQ96I15 445 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 SEMA4GQ9NTN9 838 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 EFCAB6Q5THR3 1501 aa3.49□□□□□ -1.85
DEPDC4-204ENST00000547823 COL22A1Q8NFW1 1626 aaPredicted RBP3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 RALGAPBQ86X10 1494 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 TNS1Q9HBL0 1735 aaKnown RBP3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 ST20-MTHFSA0A0A6YYL1 179 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 DNAJC9-AS1A6NH13 148 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 M0R2C6 588 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms