RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 ALKAL1Q6UXT8 129 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 TMC5Q6UXY8 1006 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 GPR149Q86SP6 731 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 CABP7Q86V35 215 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 GPR65Q8IYL9 337 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 TMEM87AQ8NBN3 555 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 TMEM161BQ8NDZ6 487 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 AK8Q96MA6 479 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 TARS2Q9BW92 718 aaKnown RBP11.33□□□□□ -0.6
BEST3-208ENST00000547208 MRPL4Q9BYD3 311 aaKnown RBP11.33□□□□□ -0.6
BEST3-208ENST00000547208 CDT1Q9H211 546 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 SFXN1Q9H9B4 322 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 KMT5AQ9NQR1 393 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 BLOC1S4Q9NUP1 217 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 FAM86C1Q9NVL1 165 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 KCND2Q9NZV8 630 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
BEST3-208ENST00000547208 SSX2IPQ9Y2D8 614 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 GDAQ9Y2T3 454 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
BEST3-208ENST00000547208 ZDBF2Q9HCK1 2354 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 NPHP3-ACAD11A0A0J9YXS1 232 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 SLC16A4O15374 487 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 SLC26A4O43511 780 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 BRD1O95696 1058 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 ADH1AP07327 375 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 MAPTP10636 758 aaKnown RBP11.32□□□□□ -0.6
BEST3-208ENST00000547208 PLS3P13797 630 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 GRM5P41594 1212 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 PTPAQ15257 358 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 SF3A1Q15459 793 aaKnown RBP11.32□□□□□ -0.6
BEST3-208ENST00000547208 PTPN21Q16825 1174 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 USP41Q3LFD5 358 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 ZNF568Q3ZCX4 644 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 RTP2Q5QGT7 225 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 LILRA6Q6PI73 481 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 CD300LGQ6UXG3 332 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 HASPINQ8TF76 798 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 KCNN1Q92952 543 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 RIPOR3Q96MK2 946 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 FNIP2Q9P278 1114 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 TSC2P49815 1807 aa11.32□□□□□ -0.6
BEST3-208ENST00000547208 SF3B1O75533 1304 aaKnown RBP eCLIP11.32□□□□□ -0.6
BEST3-208ENST00000547208 VPS37CA5D8V6 355 aaPredicted RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 TMEM189-UBE2V1I3L0A0 370 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 TADA2AO75478 443 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 BMP15O95972 392 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 GLUD1P00367 558 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 C1RP00736 705 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 RPL17P18621 184 aaKnown RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 PLCG1P19174 1290 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 SYT1P21579 422 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 NCKAP1LP55160 1127 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 SOX4Q06945 474 aaPredicted RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 RESTQ13127 1097 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 GLRA4Q5JXX5 417 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 ATAT1Q5SQI0 421 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 PRSS55Q6UWB4 352 aaPredicted RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 MPZL3Q6UWV2 235 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 C15orf39Q6ZRI6 1047 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 TRIM67Q6ZTA4 783 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 C3orf58Q8NDZ4 430 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 CMASQ8NFW8 434 aaPredicted RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 LNX1Q8TBB1 728 aaPredicted RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 RIN2Q8WYP3 895 aaPredicted RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 ASIC4Q96FT7 647 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 INTS4Q96HW7 963 aaKnown RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 ZBTB45Q96K62 511 aaPredicted RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 ZMAT2Q96NC0 199 aaKnown RBP11.31□□□□□ -0.6
BEST3-208ENST00000547208 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 RHOBTB2Q9BYZ6 727 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 GOLGA2P5Q9HBQ8 144 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.31□□□□□ -0.6
BEST3-208ENST00000547208 USTQ9Y2C2 406 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 NR2E1Q9Y466 385 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 CLIC4Q9Y696 253 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 TCHHQ07283 1943 aa11.31□□□□□ -0.6
BEST3-208ENST00000547208 SMIM28A0A1B0GU29 152 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 TMEM221A6NGB7 291 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 M0R296 226 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 TGM5O43548 720 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 RFPL2O75678 378 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 SPATA31D3P0C874 917 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 MCF2P10911 925 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 PDCP20941 246 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 LONP1P36776 959 aaKnown RBP11.3□□□□□ -0.6
BEST3-208ENST00000547208 UBA7P41226 1012 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 CLCNKBP51801 687 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 ZNF131P52739 623 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 OSTNP61366 133 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 KARSQ15046 597 aaKnown RBP11.3□□□□□ -0.6
BEST3-208ENST00000547208 UPP1Q16831 310 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 FAM171A1Q5VUB5 890 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 FAM173BQ6P4H8 233 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 SPATA31D4Q6ZUB0 917 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 APBB1IPQ7Z5R6 666 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms