RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCAF11-209ENST00000547018 UBE4BO95155 1302 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-209ENST00000547018 VTNP04004 478 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 RRM1P23921 792 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-209ENST00000547018 FMO1Q01740 532 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 CEP85LQ5SZL2 805 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 USP37Q86T82 979 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 SYCE1Q8N0S2 351 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 CHST13Q8NET6 341 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 MAGOHBQ96A72 148 aaKnown RBP13.65□□□□□ -0.22
SCAF11-209ENST00000547018 C18orf8Q96DM3 657 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-209ENST00000547018 FAM53CQ9NYF3 392 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 MAP3K20Q9NYL2 800 aaKnown RBP13.65□□□□□ -0.22
SCAF11-209ENST00000547018 AKT3Q9Y243 479 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 ATP8A1Q9Y2Q0 1164 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 COL11A1P12107 1806 aaPredicted RBP13.65□□□□□ -0.23
SCAF11-209ENST00000547018 ATAD5Q96QE3 1844 aa13.65□□□□□ -0.23
SCAF11-209ENST00000547018 TMEM253P0C7T8 217 aa13.65□□□□□ -0.23
SCAF11-209ENST00000547018 DHX9Q08211 1270 aaKnown RBP13.65□□□□□ -0.23
SCAF11-209ENST00000547018 C10orf76Q5T2E6 689 aa13.65□□□□□ -0.23
SCAF11-209ENST00000547018 DCAF12L1Q5VU92 463 aa13.65□□□□□ -0.23
SCAF11-209ENST00000547018 HELQQ8TDG4 1101 aa13.65□□□□□ -0.23
SCAF11-209ENST00000547018 ATG4AQ8WYN0 398 aa13.65□□□□□ -0.23
SCAF11-209ENST00000547018 ZNF646O15015 1829 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-209ENST00000547018 PI4K2BG5E9Z4 385 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 SYF2O95926 243 aaKnown RBP13.64□□□□□ -0.23
SCAF11-209ENST00000547018 RAP1GAPP47736 663 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 TUBB4BP68371 445 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 PAK2Q13177 524 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 FOXR1Q6PIV2 292 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 CCDC105Q8IYK2 499 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 C12orf42Q96LP6 360 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 SUCLA2Q9P2R7 463 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-209ENST00000547018 GOLGA8SH3BPF8 625 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 O00370 1275 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 ATP8B1O43520 1251 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 PRLRP16471 622 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 MAPK4P31152 587 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 MTM1Q13496 603 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 TRPC3Q13507 836 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 HAUS1Q96CS2 278 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 CPB2Q96IY4 423 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 ZIM3Q96PE6 472 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 APOL6Q9BWW8 343 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 IMPG2Q9BZV3 1241 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 RSPH14Q9UHP6 348 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 ADAMTS5Q9UNA0 930 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 SSC5DA1L4H1 1573 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 EVPLQ92817 2033 aa13.64□□□□□ -0.23
SCAF11-209ENST00000547018 TARSL2A2RTX5 802 aaKnown RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 OAZ1P54368 228 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 EPHB4P54760 987 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 NEDD9Q14511 834 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 PRAMEF19Q5SWL8 479 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 FAM160B1Q5W0V3 765 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 EFCAB12Q6NXP0 572 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 DPP9Q86TI2 863 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 AFAP1L1Q8TED9 768 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 CCDC113Q9H0I3 377 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 NUB1Q9Y5A7 615 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 PYGMP11217 842 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 PSMC4P43686 418 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 NSFP46459 744 aaKnown RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 CDH8P55286 799 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 MYL6P60660 151 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 LAMTOR4Q0VGL1 99 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 NCOA4Q13772 614 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 ZNF568Q3ZCX4 644 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 EEF1DP3Q658K8 133 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 MMS22LQ6ZRQ5 1243 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 PRUNE1Q86TP1 453 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 RIOX2Q8IUF8 465 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 KCTD17Q8N5Z5 321 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 PSPC1Q8WXF1 523 aaKnown RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 ARHGAP28Q9P2N2 729 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 IVNS1ABPQ9Y6Y0 642 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 EXTL3O43909 919 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 RTN2O75298 545 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 PRKCBP05771 671 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 SCP2P22307 547 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 ADCYAP1R1P41586 468 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 NOP14P78316 857 aaKnown RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 KIF22Q14807 665 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 LEKR1Q6ZMV7 388 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 FAM71AQ8IYT1 594 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 AENQ8WTP8 325 aaKnown RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 SPIRE2Q8WWL2 714 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 LENG1Q96BZ8 264 aaPredicted RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 APOBEC3GQ9HC16 384 aaKnown RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.63□□□□□ -0.23
SCAF11-209ENST00000547018 FER1L6Q2WGJ9 1857 aa13.63□□□□□ -0.23
SCAF11-209ENST00000547018 AGPSO00116 658 aa13.62□□□□□ -0.23
SCAF11-209ENST00000547018 BRD2P25440 801 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms