RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 MMRN2Q9H8L6 949 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 FAM207AQ9NSI2 230 aaPredicted RBP17.79■□□□□ 0.44
BRF1-208ENST00000546997 TBX20Q9UMR3 447 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 SNX12Q9UMY4 172 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 ENC1O14682 589 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 CHUKO15111 745 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 CETN3O15182 167 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 EPHB6O15197 1021 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 HSF2BPO75031 334 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 TCP1P17987 556 aaKnown RBP17.78■□□□□ 0.44
BRF1-208ENST00000546997 HNRNPH3P31942 346 aaKnown RBP17.78■□□□□ 0.44
BRF1-208ENST00000546997 NAMPTP43490 491 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 LAMTOR4Q0VGL1 99 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 KCNMA1Q12791 1236 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 ALCAMQ13740 583 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 KDM7AQ6ZMT4 941 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 CD302Q8IX05 232 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 GPATCH11Q8N954 259 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 C3orf20Q8ND61 904 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 SLC17A8Q8NDX2 589 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
BRF1-208ENST00000546997 RUFY1Q96T51 708 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 JPH2Q9BR39 696 aaPredicted RBP17.78■□□□□ 0.44
BRF1-208ENST00000546997 SPC25Q9HBM1 224 aa17.78■□□□□ 0.44
BRF1-208ENST00000546997 SUCLA2Q9P2R7 463 aaPredicted RBP17.78■□□□□ 0.44
BRF1-208ENST00000546997 STK25O00506 426 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 CLIC2O15247 247 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 NR2F2P24468 414 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 PPP2R5AQ15172 486 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 SND1Q7KZF4 910 aaKnown RBP eCLIP17.77■□□□□ 0.44
BRF1-208ENST00000546997 RHPN2Q8IUC4 686 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 EXOC8Q8IYI6 725 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 TCP11Q8WWU5 503 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 ZNF668Q96K58 619 aaPredicted RBP17.77■□□□□ 0.44
BRF1-208ENST00000546997 RNF14Q9UBS8 474 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 TRIM10Q9UDY6 481 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 PLAGL2Q9UPG8 496 aa17.77■□□□□ 0.44
BRF1-208ENST00000546997 NRCAMQ92823 1304 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 NDUFAB1O14561 156 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 MAGEB2O15479 319 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 CALUO43852 315 aaPredicted RBP17.77■□□□□ 0.43
BRF1-208ENST00000546997 VAV2P52735 878 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 KIF5AQ12840 1032 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 CCSAPQ6IQ19 270 aaPredicted RBP17.77■□□□□ 0.43
BRF1-208ENST00000546997 CREG2Q8IUH2 290 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 MAP4K3Q8IVH8 894 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 SYCP3Q8IZU3 236 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 KLHDC9Q8NEP7 349 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 ACCSQ96QU6 501 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 NHEJ1Q9H9Q4 299 aaPredicted RBP17.77■□□□□ 0.43
BRF1-208ENST00000546997 AGPAT3Q9NRZ7 376 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 PTPN22Q9Y2R2 807 aa17.77■□□□□ 0.43
BRF1-208ENST00000546997 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.77■□□□□ 0.43
BRF1-208ENST00000546997 PDE2AO00408 941 aaPredicted RBP17.76■□□□□ 0.43
BRF1-208ENST00000546997 NR3C1P04150 777 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 SRGAP2CP0DJJ0 459 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 MXD4Q14582 209 aaPredicted RBP17.76■□□□□ 0.43
BRF1-208ENST00000546997 MREGQ8N565 214 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 RNF149Q8NC42 400 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 DEPTORQ8TB45 409 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 SECISBP2LQ93073 1101 aaKnown RBP17.76■□□□□ 0.43
BRF1-208ENST00000546997 KATNAL1Q9BW62 490 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 EDEM3Q9BZQ6 932 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 EPN3Q9H201 632 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 HMX1Q9NP08 348 aaPredicted RBP17.76■□□□□ 0.43
BRF1-208ENST00000546997 USP20Q9Y2K6 914 aa17.76■□□□□ 0.43
BRF1-208ENST00000546997 SRGAP2O75044 1071 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 TACC1O75410 805 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 ASGR1P07306 291 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 ADAM17P78536 824 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 KCNA10Q16322 511 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 FBXW10Q5XX13 1052 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 LHX8Q68G74 356 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 NFRKBQ6P4R8 1299 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 HS2ST1Q7LGA3 356 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 HVCN1Q96D96 273 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 CAPZA3Q96KX2 299 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 NLRP4Q96MN2 994 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 PPP1R16BQ96T49 567 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 MTG1Q9BT17 334 aaPredicted RBP17.75■□□□□ 0.43
BRF1-208ENST00000546997 TMEM206Q9H813 350 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 CAPN7Q9Y6W3 813 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 RRN3P2A6NIE6 340 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 KPNA6O60684 536 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 VTNP04004 478 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 EDN1P05305 212 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 CST5P28325 142 aaPredicted RBP17.75■□□□□ 0.43
BRF1-208ENST00000546997 ZNF200P98182 395 aaPredicted RBP17.75■□□□□ 0.43
BRF1-208ENST00000546997 FRMD5Q7Z6J6 570 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.75■□□□□ 0.433e-6■■■■■ 50.8
BRF1-208ENST00000546997 BAP1Q92560 729 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 WDR70Q9NW82 654 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 STIM2Q9P246 746 aa17.75■□□□□ 0.43
BRF1-208ENST00000546997 MBLAC1A4D2B0 266 aaPredicted RBP17.74■□□□□ 0.43
BRF1-208ENST00000546997 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
BRF1-208ENST00000546997 CASP4P49662 377 aa17.74■□□□□ 0.43
BRF1-208ENST00000546997 CDCA2Q69YH5 1023 aaPredicted RBP17.74■□□□□ 0.43
BRF1-208ENST00000546997 SLC39A4Q6P5W5 647 aa17.74■□□□□ 0.43
BRF1-208ENST00000546997 TAX1BP1Q86VP1 789 aa17.74■□□□□ 0.43
BRF1-208ENST00000546997 CCDC50Q8IVM0 306 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms