RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 SYT2Q8N9I0 419 aaPredicted RBP24.96■■□□□ 1.59
CHD4-214ENST00000545942 PPP1R10Q96QC0 940 aaKnown RBP24.96■■□□□ 1.59
CHD4-214ENST00000545942 NTPCRQ9BSD7 190 aaKnown RBP24.96■■□□□ 1.59
CHD4-214ENST00000545942 CCDC94Q9BW85 323 aaPredicted RBP24.96■■□□□ 1.59
CHD4-214ENST00000545942 CDT1Q9H211 546 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 PTPRHQ9HD43 1115 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 KCNG1Q9UIX4 513 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 SFI1A8K8P3 1242 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 SLC16A4O15374 487 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 RFPL2O75678 378 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 HOXD11P31277 338 aaPredicted RBP24.95■■□□□ 1.58
CHD4-214ENST00000545942 GRM5P41594 1212 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 YARSP54577 528 aaKnown RBP24.95■■□□□ 1.58
CHD4-214ENST00000545942 GLRA4Q5JXX5 417 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 LILRA6Q6PI73 481 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 PRSS55Q6UWB4 352 aaPredicted RBP24.95■■□□□ 1.58
CHD4-214ENST00000545942 CEP57Q86XR8 500 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 SPIRE2Q8WWL2 714 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 PIK3R5Q8WYR1 880 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 AK8Q96MA6 479 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 PLIN2Q99541 437 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 TOPORSQ9NS56 1045 aaPredicted RBP24.95■■□□□ 1.58
CHD4-214ENST00000545942 KCND2Q9NZV8 630 aa24.95■■□□□ 1.58
CHD4-214ENST00000545942 PAPLNO95428 1278 aa24.94■■□□□ 1.58
CHD4-214ENST00000545942 SLC12A3P55017 1021 aa24.94■■□□□ 1.58
CHD4-214ENST00000545942 RAD51AP2Q09MP3 1159 aa24.94■■□□□ 1.58
CHD4-214ENST00000545942 CEP120Q8N960 986 aa24.94■■□□□ 1.58
CHD4-214ENST00000545942 SMG7Q92540 1137 aaKnown RBP24.94■■□□□ 1.58
CHD4-214ENST00000545942 STAMQ92783 540 aa24.94■■□□□ 1.58
CHD4-214ENST00000545942 UROC1Q96N76 676 aa24.94■■□□□ 1.58
CHD4-214ENST00000545942 TARS2Q9BW92 718 aaKnown RBP24.94■■□□□ 1.58
CHD4-214ENST00000545942 WDR6Q9NNW5 1121 aaKnown RBP24.94■■□□□ 1.58
CHD4-214ENST00000545942 ZDHHC7Q9NXF8 308 aa24.94■■□□□ 1.58
CHD4-214ENST00000545942 MUC6Q6W4X9 2439 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 TMEM189-UBE2V1I3L0A0 370 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 PLS3P13797 630 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 SMTNP53814 917 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 TMEM119Q4V9L6 283 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 PDXDC1Q6P996 788 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 DCLRE1AQ6PJP8 1040 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 BRAPQ7Z569 592 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 LNX1Q8TBB1 728 aaPredicted RBP24.93■■□□□ 1.58
CHD4-214ENST00000545942 ZNF707Q96C28 371 aaPredicted RBP24.93■■□□□ 1.58
CHD4-214ENST00000545942 TCHPQ9BT92 498 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 ZNF318Q5VUA4 2279 aa24.93■■□□□ 1.58
CHD4-214ENST00000545942 DENND4AQ7Z401 1863 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 SMIM28A0A1B0GU29 152 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 SLC26A4O43511 780 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 B3GAT3O94766 335 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 BMP15O95972 392 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 PLA2G4BP0C869 781 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 MCF2P10911 925 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 PROZP22891 400 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 OSTNP61366 133 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 STRN3Q13033 797 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 PSMD5Q16401 504 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 MPZL3Q6UWV2 235 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.92■■□□□ 1.58
CHD4-214ENST00000545942 PRRX2Q99811 253 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 CLSTN3Q9BQT9 956 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 SMOC2Q9H3U7 446 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 CLUHO75153 1309 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 PLXNA3P51805 1871 aa24.92■■□□□ 1.58
CHD4-214ENST00000545942 ABLIM1O14639 778 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 CLCNKBP51801 687 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 NHLH1Q02575 133 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 UPP1Q16831 310 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 XKR4Q5GH76 650 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 IER5LQ5T953 404 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 ALKAL1Q6UXT8 129 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 TMEM161BQ8NDZ6 487 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 PRKD2Q9BZL6 878 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 PIDD1Q9HB75 910 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 SLC38A7Q9NVC3 462 aa24.91■■□□□ 1.58
CHD4-214ENST00000545942 ZMYND10O75800 440 aa24.9■■□□□ 1.58
CHD4-214ENST00000545942 UBA7P41226 1012 aa24.9■■□□□ 1.58
CHD4-214ENST00000545942 CALML4Q96GE6 196 aa24.9■■□□□ 1.58
CHD4-214ENST00000545942 ACAP3Q96P50 834 aa24.9■■□□□ 1.58
CHD4-214ENST00000545942 GOLGA2P5Q9HBQ8 144 aa24.9■■□□□ 1.58
CHD4-214ENST00000545942 LARSQ9P2J5 1176 aaKnown RBP24.9■■□□□ 1.58
CHD4-214ENST00000545942 FBXW11Q9UKB1 542 aa24.9■■□□□ 1.58
CHD4-214ENST00000545942 TRAPPC3O43617 180 aa24.89■■□□□ 1.58
CHD4-214ENST00000545942 N4BP1O75113 896 aaKnown RBP24.89■■□□□ 1.58
CHD4-214ENST00000545942 TOM1L1O75674 476 aa24.89■■□□□ 1.58
CHD4-214ENST00000545942 PDGFBP01127 241 aaPredicted RBP24.89■■□□□ 1.58
CHD4-214ENST00000545942 FGFR3P22607 806 aa24.89■■□□□ 1.58
CHD4-214ENST00000545942 GBP2P32456 591 aaPredicted RBP24.89■■□□□ 1.58
CHD4-214ENST00000545942 CUL4AQ13619 759 aa24.89■■□□□ 1.58
CHD4-214ENST00000545942 DDX27Q96GQ7 796 aaKnown RBP24.89■■□□□ 1.58
CHD4-214ENST00000545942 SNX27Q96L92 541 aa24.89■■□□□ 1.58
CHD4-214ENST00000545942 KCNK12Q9HB15 430 aa24.89■■□□□ 1.58
CHD4-214ENST00000545942 WDFY4Q6ZS81 3184 aa24.89■■□□□ 1.58
CHD4-214ENST00000545942 C2orf16Q68DN1 1984 aa24.89■■□□□ 1.57
CHD4-214ENST00000545942 H0YCG3 227 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 MAPTP10636 758 aaKnown RBP24.88■■□□□ 1.57
CHD4-214ENST00000545942 IGFBP6P24592 240 aaPredicted RBP24.88■■□□□ 1.57
CHD4-214ENST00000545942 AVPR2P30518 371 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 LONP1P36776 959 aaKnown RBP24.88■■□□□ 1.57
CHD4-214ENST00000545942 VCPP55072 806 aaKnown RBP24.88■■□□□ 1.57
CHD4-214ENST00000545942 SOX4Q06945 474 aaPredicted RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms