RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 MAPK7Q13164 816 aa21.82■■□□□ 1.08
CHD4-213ENST00000545584 PDXDC1Q6P996 788 aa21.82■■□□□ 1.08
CHD4-213ENST00000545584 BRAPQ7Z569 592 aa21.82■■□□□ 1.08
CHD4-213ENST00000545584 FBXL6Q8N531 539 aa21.82■■□□□ 1.08
CHD4-213ENST00000545584 STAMQ92783 540 aa21.82■■□□□ 1.08
CHD4-213ENST00000545584 CALML4Q96GE6 196 aa21.82■■□□□ 1.08
CHD4-213ENST00000545584 TARS2Q9BW92 718 aaKnown RBP21.82■■□□□ 1.08
CHD4-213ENST00000545584 CDT1Q9H211 546 aa21.82■■□□□ 1.08
CHD4-213ENST00000545584 TGM5O43548 720 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 PLA2G4BP0C869 781 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 SPATA31D3P0C874 917 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 MYBP10242 640 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 PLS3P13797 630 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 UBA7P41226 1012 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 RAD51AP2Q09MP3 1159 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 NAB2Q15742 525 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 GLRA4Q5JXX5 417 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 RTP2Q5QGT7 225 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 PRSS55Q6UWB4 352 aaPredicted RBP21.81■■□□□ 1.08
CHD4-213ENST00000545584 SPATA31D4Q6ZUB0 917 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 SPIRE2Q8WWL2 714 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 SMG7Q92540 1137 aaKnown RBP21.81■■□□□ 1.08
CHD4-213ENST00000545584 UROC1Q96N76 676 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 NTPCRQ9BSD7 190 aaKnown RBP21.81■■□□□ 1.08
CHD4-213ENST00000545584 RHOBTB2Q9BYZ6 727 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 CXCL16Q9H2A7 254 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 PIDD1Q9HB75 910 aa21.81■■□□□ 1.08
CHD4-213ENST00000545584 MYO10Q9HD67 2058 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 PLXNA3P51805 1871 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 B3GAT3O94766 335 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 ASGR2P07307 311 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 MCF2P10911 925 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 RPL17P18621 184 aaKnown RBP21.8■■□□□ 1.08
CHD4-213ENST00000545584 OSTNP61366 133 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 PSMD5Q16401 504 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 DCLRE1AQ6PJP8 1040 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 FEZF2Q8TBJ5 459 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 PIK3R5Q8WYR1 880 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 ASIC4Q96FT7 647 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 ACAP3Q96P50 834 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 PPP1R10Q96QC0 940 aaKnown RBP21.8■■□□□ 1.08
CHD4-213ENST00000545584 PTPRHQ9HD43 1115 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 SLC38A7Q9NVC3 462 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 ZDHHC7Q9NXF8 308 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 MUC6Q6W4X9 2439 aa21.8■■□□□ 1.08
CHD4-213ENST00000545584 H0YCG3 227 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 TMEM189-UBE2V1I3L0A0 370 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 RFPL2O75678 378 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 PDCP20941 246 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 SLC12A3P55017 1021 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 TMEM119Q4V9L6 283 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 LILRA6Q6PI73 481 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 MPZL3Q6UWV2 235 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.79■■□□□ 1.08
CHD4-213ENST00000545584 TAS1R3Q7RTX0 852 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 CEP120Q8N960 986 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 RASSF8Q8NHQ8 419 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 PRRX2Q99811 253 aa21.79■■□□□ 1.08
CHD4-213ENST00000545584 WDR6Q9NNW5 1121 aaKnown RBP21.79■■□□□ 1.08
CHD4-213ENST00000545584 LARSQ9P2J5 1176 aaKnown RBP21.79■■□□□ 1.08
CHD4-213ENST00000545584 DENND4AQ7Z401 1863 aa21.78■■□□□ 1.08
CHD4-213ENST00000545584 SMIM28A0A1B0GU29 152 aa21.78■■□□□ 1.08
CHD4-213ENST00000545584 VPS37CA5D8V6 355 aaPredicted RBP21.78■■□□□ 1.08
CHD4-213ENST00000545584 TRAPPC3O43617 180 aa21.78■■□□□ 1.08
CHD4-213ENST00000545584 BRD1O95696 1058 aa21.78■■□□□ 1.08
CHD4-213ENST00000545584 HARSP12081 509 aaKnown RBP21.78■■□□□ 1.08
CHD4-213ENST00000545584 LNX1Q8TBB1 728 aaPredicted RBP21.78■■□□□ 1.08
CHD4-213ENST00000545584 DDX27Q96GQ7 796 aaKnown RBP21.78■■□□□ 1.08
CHD4-213ENST00000545584 ZNF318Q5VUA4 2279 aa21.78■■□□□ 1.08
CHD4-213ENST00000545584 CLUHO75153 1309 aa21.78■■□□□ 1.08
CHD4-213ENST00000545584 C2orf16Q68DN1 1984 aa21.78■■□□□ 1.08
CHD4-213ENST00000545584 MTCL1Q9Y4B5 1905 aaKnown RBP21.77■■□□□ 1.08
CHD4-213ENST00000545584 TOM1L1O75674 476 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 PROZP22891 400 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 GBP2P32456 591 aaPredicted RBP21.77■■□□□ 1.08
CHD4-213ENST00000545584 LONP1P36776 959 aaKnown RBP21.77■■□□□ 1.08
CHD4-213ENST00000545584 CLCNKBP51801 687 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 CUL4AQ13619 759 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 LIN9Q5TKA1 542 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 TMEM161BQ8NDZ6 487 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 CLSTN3Q9BQT9 956 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 PRKD2Q9BZL6 878 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 ANKFY1Q9P2R3 1169 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 MYH11P35749 1972 aa21.77■■□□□ 1.08
CHD4-213ENST00000545584 ZMYND10O75800 440 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 MATR3P43243 847 aaKnown RBP eCLIP21.76■■□□□ 1.072e-6■■■■□ 22.9
CHD4-213ENST00000545584 SF3A1Q15459 793 aaKnown RBP21.76■■□□□ 1.07
CHD4-213ENST00000545584 UPP1Q16831 310 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 XKR4Q5GH76 650 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 ALKAL1Q6UXT8 129 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 ZPBP2Q6X784 338 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 ZNF707Q96C28 371 aaPredicted RBP21.76■■□□□ 1.07
CHD4-213ENST00000545584 SNX27Q96L92 541 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 IGSF9Q9P2J2 1179 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 FBXW11Q9UKB1 542 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 ODF2LQ9ULJ1 636 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 TRIOO75962 3097 aa21.76■■□□□ 1.07
CHD4-213ENST00000545584 PAPLNO95428 1278 aa21.75■■□□□ 1.07
CHD4-213ENST00000545584 MAPTP10636 758 aaKnown RBP21.75■■□□□ 1.07
CHD4-213ENST00000545584 FGFR3P22607 806 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms