RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 FBXO33Q7Z6M2 555 aa9.54□□□□□ -0.88
NECAP1-207ENST00000544891 SLC44A5Q8NCS7 719 aa9.54□□□□□ -0.88
NECAP1-207ENST00000544891 MED15Q96RN5 788 aa9.54□□□□□ -0.88
NECAP1-207ENST00000544891 GOLPH3LQ9H4A5 285 aa9.54□□□□□ -0.88
NECAP1-207ENST00000544891 SLC38A7Q9NVC3 462 aa9.54□□□□□ -0.88
NECAP1-207ENST00000544891 SUCLA2Q9P2R7 463 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-207ENST00000544891 ATF5Q9Y2D1 282 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-207ENST00000544891 DUOX1Q9NRD9 1551 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 A8MXQ7 604 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 TDP2O95551 362 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 SESN3P58005 492 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 PIGHQ14442 188 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 MORF4L2Q15014 288 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 TBCCQ15814 346 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 P3H1Q32P28 736 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 FRA10AC1Q70Z53 315 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 DAGLBQ8NCG7 672 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 PPP2R3CQ969Q6 453 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 CHMP6Q96FZ7 201 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 NSMCE4AQ9NXX6 385 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 TBK1Q9UHD2 729 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 KCNH4Q9UQ05 1017 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 GMNCA6NCL1 334 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 TRIM49BA6NDI0 452 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 FXR2P51116 673 aaKnown RBP eCLIP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 CDO1Q16878 200 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 ST13P4Q8IZP2 240 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 SRBD1Q8N5C6 995 aaKnown RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 C18orf8Q96DM3 657 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 CYTH2Q99418 400 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 KRT14P02533 472 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 PRKCBP05771 671 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 NCF2P19878 526 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 YWHABP31946 246 aaKnown RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 LRIG3Q6UXM1 1119 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 RHPN2Q8IUC4 686 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 TRIM4Q9C037 500 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 PRMT7Q9NVM4 692 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 PPARGC1AQ9UBK2 798 aaKnown RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 APEX2Q9UBZ4 518 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 COL24A1Q17RW2 1714 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 FLT1P17948 1338 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 GYG2O15488 501 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 HAUS5O94927 633 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 CAMTA2O94983 1202 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 ITIH2P19823 946 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 ACTR2P61160 394 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 YWHAHQ04917 246 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 ANO4Q32M45 955 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 ULK4Q96C45 1275 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 ZBED2Q9BTP6 218 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 RPAP3Q9H6T3 665 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 GPBP1L1Q9HC44 474 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-207ENST00000544891 SNX12Q9UMY4 172 aa9.53□□□□□ -0.88
NECAP1-207ENST00000544891 RRN3P2A6NIE6 340 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 MYO1DO94832 1006 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 NDUFB10O96000 172 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 AGTP01019 485 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 KRT16P08779 473 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 CYP2C8P10632 490 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 RPA1P27694 616 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 TRIP13Q15645 432 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-207ENST00000544891 FAM102AQ5T9C2 384 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-207ENST00000544891 CCDC137Q6PK04 289 aaKnown RBP9.52□□□□□ -0.89
NECAP1-207ENST00000544891 SCN4BQ8IWT1 228 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 STAG2Q8N3U4 1231 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 AGBL3Q8NEM8 1001 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 COG1Q8WTW3 980 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 MAML1Q92585 1016 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 YY1AP1Q9H869 796 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 TMEM51Q9NW97 253 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 ADAM21Q9UKJ8 722 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 GPR75-ASB3A0A0A6YYF3 556 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 DPYSL4O14531 572 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 GH1P01241 217 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 BRAFP15056 766 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 CACNB3P54284 484 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 ABCE1P61221 599 aaKnown RBP9.52□□□□□ -0.89
NECAP1-207ENST00000544891 IER5Q5VY09 327 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 BTBD8Q5XKL5 378 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 ZNF280CQ8ND82 737 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 TTC17Q96AE7 1141 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 ATP6V1G3Q96LB4 118 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 POLR3CQ9BUI4 534 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-207ENST00000544891 FRMD8P1Q9BZ68 369 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-207ENST00000544891 ASPSCR1Q9BZE9 553 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 WWP1Q9H0M0 922 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 TMEM260Q9NX78 707 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 L3MBTL1Q9Y468 752 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 PCDHB2Q9Y5E7 798 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 CASP2P42575 452 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 MAGEA9P43362 315 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 PRAMEP78395 509 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 GFPT1Q06210 699 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-207ENST00000544891 SF3A3Q12874 501 aaKnown RBP eCLIP9.52□□□□□ -0.89
NECAP1-207ENST00000544891 KRT33BQ14525 404 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 RAB42Q8N4Z0 105 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 CATSPER1Q8NEC5 780 aa9.52□□□□□ -0.89
NECAP1-207ENST00000544891 SCFD1Q8WVM8 642 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms