RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	CASTOR2	A6NHX0	329 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	C2CD2L	O14523	706 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	PTGES	O14684	152 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	ADH1A	P07327	375 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	KLRC2	P26717	231 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	OSTN	P61366	133 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	MCL1	Q07820	350 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	ELAVL2	Q12926	359 aa	Known RBP	13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	USP41	Q3LFD5	358 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	CES5A	Q6NT32	575 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	DYM	Q7RTS9	669 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	ADHFE1	Q8IWW8	467 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	VN1R2	Q8NFZ6	395 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	DDX12P	Q92771	950 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	VN1R3	Q9BXE9	311 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	CUEDC2	Q9H467	287 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	DPP7	Q9UHL4	492 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	ATP6V1D	Q9Y5K8	247 aa		13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.82	□□□□□ -0.2
CLPB-213	ENST00000544382	ME1	P48163	572 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	AMPD3	Q01432	767 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	DSG1	Q02413	1049 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	KCNC3	Q14003	757 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	GLRA4	Q5JXX5	417 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	PDXDC1	Q6P996	788 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	GPR65	Q8IYL9	337 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	GJD3	Q8N144	294 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	PDILT	Q8N807	584 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	CEP120	Q8N960	986 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	HVCN1	Q96D96	273 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	DDX27	Q96GQ7	796 aa	Known RBP	13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	SNX27	Q96L92	541 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	PPP1R10	Q96QC0	940 aa	Known RBP	13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	PYM1	Q9BRP8	204 aa	Known RBP	13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	PANK2	Q9BZ23	570 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	FAM13B	Q9NYF5	915 aa		13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	USP15	Q9Y4E8	981 aa	Predicted RBP	13.81	□□□□□ -0.2
CLPB-213	ENST00000544382	SMIM28	A0A1B0GU29	152 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	MYMK	A6NI61	221 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	ABLIM1	O14639	778 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	TRAPPC3	O43617	180 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	B3GAT3	O94766	335 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	KIF4A	O95239	1232 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	PIGR	P01833	764 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	CLTA	P09496	248 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	CNP	P09543	421 aa	Known RBP	13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	IDE	P14735	1019 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	KCNE1	P15382	129 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	RBM10	P98175	930 aa	Known RBP	13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	GTF2B	Q00403	316 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	ZP2	Q05996	745 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	ITIH3	Q06033	890 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	ALCAM	Q13740	583 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	CCDC65	Q8IXS2	484 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	RNF168	Q8IYW5	571 aa	Predicted RBP	13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	IQUB	Q8NA54	791 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	ZBTB45	Q96K62	511 aa	Predicted RBP	13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	NECTIN4	Q96NY8	510 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	KLHL5	Q96PQ7	755 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	TNMD	Q9H2S6	317 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	ST6GALNAC4	Q9H4F1	302 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	MRPL44	Q9H9J2	332 aa	Known RBP	13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	PLEKHA5	Q9HAU0	1116 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	MAGEF1	Q9HAY2	307 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	CNTN3	Q9P232	1028 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	EXOC7	Q9UPT5	735 aa		13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	PDCD11	Q14690	1871 aa	Known RBP	13.8	□□□□□ -0.2
CLPB-213	ENST00000544382	BDP1	A6H8Y1	2624 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	TMEM189-UBE2V1	I3L0A0	370 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	OGT	O15294	1046 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	XPOT	O43592	962 aa	Known RBP	13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	LILRB3	O75022	631 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	NMT1	P30419	496 aa	Known RBP	13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	DNM1	Q05193	864 aa	Known RBP	13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	PKP1	Q13835	747 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	XKR4	Q5GH76	650 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	KIAA0319	Q5VV43	1072 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	SLFN12L	Q6IEE8	588 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	DCLRE1A	Q6PJP8	1040 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	ALKAL1	Q6UXT8	129 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	STXBP4	Q6ZWJ1	553 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	SFR1	Q86XK3	245 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	MAP4K3	Q8IVH8	894 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	HASPIN	Q8TF76	798 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	SLC22A17	Q8WUG5	538 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	RIN2	Q8WYP3	895 aa	Predicted RBP	13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	RABGGTA	Q92696	567 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	FBXL18	Q96ME1	805 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	RIPOR3	Q96MK2	946 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	TTPAL	Q9BTX7	342 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	MSTO1	Q9BUK6	570 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	PHF7	Q9BWX1	381 aa	Predicted RBP	13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	GPR62	Q9BZJ7	368 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	SFXN1	Q9H9B4	322 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	CHST7	Q9NS84	486 aa		13.79	□□□□□ -0.2
CLPB-213	ENST00000544382	FNIP2	Q9P278	1114 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms