RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 PPP1R16BQ96T49 567 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 DUSP9Q99956 384 aaKnown RBP5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 EMILIN2Q9BXX0 1053 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 MRPL9Q9BYD2 267 aaKnown RBP5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 FAM126AQ9BYI3 521 aaPredicted RBP5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 RNF41Q9H4P4 317 aaPredicted RBP5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 AZI2Q9H6S1 392 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 DCTPP1Q9H773 170 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 LTB4R2Q9NPC1 389 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 MAN1C1Q9NR34 630 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 ZSWIM5Q9P217 1185 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 DMGDHQ9UI17 866 aaKnown RBP5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 FKBPLQ9UIM3 349 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 UBIAD1Q9Y5Z9 338 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 LAMA4Q16363 1823 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 FREM2Q5SZK8 3169 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 MIA3Q5JRA6 1907 aa5.5□□□□□ -1.53
NPIPB4-219ENST00000543660 LAMA1P25391 3075 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 CELSR3Q9NYQ7 3312 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 EVPLQ92817 2033 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 DOCK6Q96HP0 2047 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 IGKV6D-21A0A0A0MT36 114 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 SHISA7A6NL88 538 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 SRRM3A6NNA2 597 aaPredicted RBP5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 B4E1Z4 1266 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 INPPL1O15357 1258 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 B4GALT3O60512 393 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 ZC3H11AO75152 810 aaKnown RBP eCLIP5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 RFPL2O75678 378 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 VTNP04004 478 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 TARSP26639 723 aaKnown RBP5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 RPS9P46781 194 aaKnown RBP5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 LIMK1P53667 647 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 ACTR2P61160 394 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 RING1Q06587 406 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 MTAPQ13126 283 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 MTMR1Q13613 665 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 AGERQ15109 404 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 SEC23AQ15436 765 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 PLEKHG6Q3KR16 790 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 MCMDC2Q4G0Z9 681 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 ZBTB41Q5SVQ8 909 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 PARM1Q6UWI2 310 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 RSPO2Q6UXX9 243 aaPredicted RBP5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 SMG7Q92540 1137 aaKnown RBP5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 CRELD1Q96HD1 420 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 PRIMPOLQ96LW4 560 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 SPOCK3Q9BQ16 436 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 ADAMTS10Q9H324 1103 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 NRDE2Q9H7Z3 1164 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 JPH1Q9HDC5 661 aaPredicted RBP5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 GEMIN8Q9NWZ8 242 aaKnown RBP5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 SLC9A2Q9UBY0 812 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 DNAJB4Q9UDY4 337 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 RAB23Q9ULC3 237 aa5.49□□□□□ -1.53
NPIPB4-219ENST00000543660 COL1A2P08123 1366 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 K7ELQ4 463 aaPredicted RBP5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 TAF4O00268 1085 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 ZNF213O14771 459 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 TEX28O15482 410 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 SH3BP5O60239 455 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 HBP1O60381 514 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 C22orf31O95567 290 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 SSBP05455 408 aaKnown RBP eCLIP5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 MYBP10242 640 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 ZSCAN20P17040 1043 aaPredicted RBP5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 ATP4AP20648 1035 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 EIF4BP23588 611 aaKnown RBP5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 SLC11A1P49279 550 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 SLC26A2P50443 739 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 CLDN10P78369 228 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 IRX6P78412 446 aaPredicted RBP5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 LONRF3Q496Y0 759 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 RNFT1Q5M7Z0 435 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 IFIT1BQ5T764 474 aaKnown RBP5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 IL31Q6EBC2 164 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 ALG1LQ6GMV1 187 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 GET4Q7L5D6 327 aaPredicted RBP5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 SMARCC2Q8TAQ2 1214 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 EVI5LQ96CN4 794 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 FRMD6Q96NE9 622 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 MYL10Q9BUA6 226 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 MKNK1Q9BUB5 465 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 NT5C3AQ9H0P0 336 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 JADE2Q9NQC1 790 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 MRPL17Q9NRX2 175 aaKnown RBP5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 TBC1D13Q9NVG8 400 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 WASF3Q9UPY6 502 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 MAP4K5Q9Y4K4 846 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 RALGAPA1Q6GYQ0 2036 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 NFASCO94856 1347 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
NPIPB4-219ENST00000543660 ASXL3Q9C0F0 2248 aa5.47□□□□□ -1.53
NPIPB4-219ENST00000543660 MEIS3P2A8K0S8 358 aa5.47□□□□□ -1.53
NPIPB4-219ENST00000543660 C2CD2LO14523 706 aa5.47□□□□□ -1.53
NPIPB4-219ENST00000543660 PRC1O43663 620 aa5.47□□□□□ -1.53
NPIPB4-219ENST00000543660 FOXD2O60548 495 aaPredicted RBP5.47□□□□□ -1.53
NPIPB4-219ENST00000543660 OFD1O75665 1012 aa5.47□□□□□ -1.53
NPIPB4-219ENST00000543660 KCNK5O95279 499 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms