RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 DLL1O00548 723 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 MGEA5O60502 916 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 PFKMP08237 780 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 GTF2H1P32780 548 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 TNFSF9P41273 254 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 YARSP54577 528 aaKnown RBP17.4■□□□□ 0.38
TRIM65-204ENST00000543309 UBASH3AP57075 661 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 ENOX2Q16206 610 aaKnown RBP17.4■□□□□ 0.38
TRIM65-204ENST00000543309 FILIP1LQ4L180 1135 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 VWA3BQ502W6 1294 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 SLC24A5Q71RS6 500 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 CREBRFQ8IUR6 639 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 TMEM199Q8N511 208 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 SMG8Q8ND04 991 aaKnown RBP17.4■□□□□ 0.38
TRIM65-204ENST00000543309 DBF4BQ8NFT6 615 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 NDST4Q9H3R1 872 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 NXF3Q9H4D5 531 aaKnown RBP17.4■□□□□ 0.38
TRIM65-204ENST00000543309 ASB7Q9H672 318 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 TOPORSQ9NS56 1045 aaPredicted RBP17.4■□□□□ 0.38
TRIM65-204ENST00000543309 TAB2Q9NYJ8 693 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 STXBP5LQ9Y2K9 1186 aa17.4■□□□□ 0.38
TRIM65-204ENST00000543309 ANK1P16157 1881 aa17.39■□□□□ 0.38
TRIM65-204ENST00000543309 TTC26A0AVF1 554 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 PMM2O15305 246 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 AP3M2P53677 418 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 SEZ6Q53EL9 994 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 CNKSR3Q6P9H4 555 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 NT5DC4Q86YG4 428 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 PLEKHO2Q8TD55 490 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 FNBP1Q96RU3 617 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 CGRRF1Q99675 332 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 TRIM5Q9C035 493 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
TRIM65-204ENST00000543309 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
TRIM65-204ENST00000543309 MTMR10Q9NXD2 777 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 IFNKQ9P0W0 207 aa17.39■□□□□ 0.37
TRIM65-204ENST00000543309 CITO14578 2027 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 GTPBP10A4D1E9 387 aaKnown RBP17.38■□□□□ 0.37
TRIM65-204ENST00000543309 C9IYK1 514 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 P4HA2O15460 535 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 AP5Z1O43299 807 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 N4BP1O75113 896 aaKnown RBP17.38■□□□□ 0.37
TRIM65-204ENST00000543309 EOMESO95936 686 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 AFPP02771 609 aaKnown RBP17.38■□□□□ 0.37
TRIM65-204ENST00000543309 CXCL8P10145 99 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 ITGB8P26012 769 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 OSTNP61366 133 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 FAM189BP81408 668 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 KCNH2Q12809 1159 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 NR1I3Q14994 352 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 SLC10A6Q3KNW5 377 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 DCAF17Q5H9S7 520 aaPredicted RBP17.38■□□□□ 0.37
TRIM65-204ENST00000543309 C1orf220Q5T0J3 134 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 TCERG1LQ5VWI1 586 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 ALKAL1Q6UXT8 129 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 WDR49Q8IV35 697 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 TMEM192Q8IY95 271 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 RPUSD2Q8IZ73 545 aaKnown RBP17.38■□□□□ 0.37
TRIM65-204ENST00000543309 PGBD4Q96DM1 585 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 MRFAP1L1Q96HT8 127 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 SNX27Q96L92 541 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 NAP1L5Q96NT1 182 aaPredicted RBP17.38■□□□□ 0.37
TRIM65-204ENST00000543309 VPS16Q9H269 839 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 PDE11AQ9HCR9 933 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 UBN1Q9NPG3 1134 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 SNTG2Q9NY99 539 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 DERAQ9Y315 318 aa17.38■□□□□ 0.37
TRIM65-204ENST00000543309 LRRIQ3A6PVS8 624 aaPredicted RBP17.37■□□□□ 0.37
TRIM65-204ENST00000543309 EFCAB14O75071 495 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 RECQL4O94761 1208 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 ITGA4P13612 1032 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 ZNF75DP51815 510 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 XKR4Q5GH76 650 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 FKBP15Q5T1M5 1219 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 ZNF598Q86UK7 904 aaKnown RBP17.37■□□□□ 0.37
TRIM65-204ENST00000543309 RTN4RL1Q86UN2 441 aaPredicted RBP17.37■□□□□ 0.37
TRIM65-204ENST00000543309 ECHDC2Q86YB7 292 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 LINC01599Q8WXQ3 324 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 CCDC127Q96BQ5 260 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 VWCEQ96DN2 955 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 XPO4Q9C0E2 1151 aaKnown RBP17.37■□□□□ 0.37
TRIM65-204ENST00000543309 ELAC1Q9H777 363 aaKnown RBP17.37■□□□□ 0.37
TRIM65-204ENST00000543309 TMEM8AQ9HCN3 771 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 CNTN3Q9P232 1028 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 GIT1Q9Y2X7 761 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 C2CD2Q9Y426 696 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 HES2Q9Y543 173 aa17.37■□□□□ 0.37
TRIM65-204ENST00000543309 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.37■□□□□ 0.37
TRIM65-204ENST00000543309 PDCD11Q14690 1871 aaKnown RBP17.36■□□□□ 0.37
TRIM65-204ENST00000543309 LACTBL1A8MY62 500 aa17.36■□□□□ 0.37
TRIM65-204ENST00000543309 ENPP3O14638 875 aa17.36■□□□□ 0.37
TRIM65-204ENST00000543309 INPPL1O15357 1258 aa17.36■□□□□ 0.37
TRIM65-204ENST00000543309 MEFVO15553 781 aaPredicted RBP17.36■□□□□ 0.37
TRIM65-204ENST00000543309 TRIM49P0CI25 452 aa17.36■□□□□ 0.37
TRIM65-204ENST00000543309 TRIM49CP0CI26 452 aa17.36■□□□□ 0.37
TRIM65-204ENST00000543309 DLATP10515 647 aaKnown RBP17.36■□□□□ 0.37
TRIM65-204ENST00000543309 CSF2RAP15509 400 aa17.36■□□□□ 0.37
TRIM65-204ENST00000543309 ATF7P17544 494 aaPredicted RBP17.36■□□□□ 0.37
TRIM65-204ENST00000543309 FMO5P49326 533 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms