RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 MAPK13O15264 365 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 EXOC3O60645 756 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 GJB5O95377 273 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 SKIP12755 728 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 ACTN1P12814 892 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 ITGA4P13612 1032 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 ANK1P16157 1881 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 MLH1P40692 756 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 MARSP56192 900 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 DLG4P78352 724 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 CLDN10P78369 228 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 CYP24A1Q07973 514 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 SPATA1Q5VX52 437 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 FILIP1Q7Z7B0 1213 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 CSGALNACT2Q8N6G5 542 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 RDH13Q8NBN7 331 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 RNF169Q8NCN4 708 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 PHOSPHO2Q8TCD6 241 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 HELQQ8TDG4 1101 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 CEP63Q96MT8 703 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 ACAP3Q96P50 834 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 PPP1R10Q96QC0 940 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 POP1Q99575 1024 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 SRRTQ9BXP5 876 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 TRIM6Q9C030 488 aaPredicted RBP11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 UBE2OQ9C0C9 1292 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 CBX8Q9HC52 389 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 PDE11AQ9HCR9 933 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 SAMSN1Q9NSI8 373 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 CNTN3Q9P232 1028 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
NPIPB3-210ENST00000542817 LCHNA4D1U4 455 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 ZBBXA8MT70 800 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 CETN3O15182 167 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 UPP2O95045 317 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 LDHAP00338 332 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 AMHP03971 560 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 NFICP08651 508 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 IBSPP21815 317 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 ZNF165P49910 485 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 SOX4Q06945 474 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 SPAG1Q07617 926 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 PSMD6Q15008 389 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 ZNF280BQ86YH2 543 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 HERC6Q8IVU3 1022 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 SP7Q8TDD2 431 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 PARD3BQ8TEW8 1205 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 C18orf25Q96B23 403 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 MKNK1Q9BUB5 465 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 CCDC94Q9BW85 323 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 CWH43Q9H720 699 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 RSAD1Q9HA92 442 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 PLEKHA5Q9HAU0 1116 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 TOPORSQ9NS56 1045 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 FANCLQ9NW38 375 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 RBAKQ9NYW8 714 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 NFE2L3Q9Y4A8 694 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 PCDHB7Q9Y5E2 793 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 SLC4A7Q9Y6M7 1214 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 FNDC1Q4ZHG4 1894 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 ZNF233A6NK53 670 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 LRRIQ3A6PVS8 624 aaPredicted RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 IKBKBO14920 756 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 SLC16A3O15427 465 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 DDHD2O94830 711 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 MYOGP15173 224 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 RPL13P26373 211 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 PSMC2P35998 433 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 MATR3P43243 847 aaKnown RBP eCLIP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 SCNN1GP51170 649 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 GUCY2FP51841 1108 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 RABGGTBP53611 331 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 DSC1Q08554 894 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 KYAT1Q16773 422 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 GLIPR1L2Q4G1C9 344 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 GLRA4Q5JXX5 417 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 CEP135Q66GS9 1140 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 JADE1Q6IE81 842 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 FAM117BQ6P1L5 589 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 CD300LGQ6UXG3 332 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 C15orf39Q6ZRI6 1047 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 SPRED2Q7Z698 418 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 LUZP1Q86V48 1076 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 FAM186BQ8IYM0 893 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 AOPEPQ8N6M6 819 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 OR5B17Q8NGF7 314 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 PGBD4Q96DM1 585 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 RNPC3Q96LT9 517 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 SLC9A7Q96T83 725 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 TSG101Q99816 390 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 TMEM117Q9H0C3 514 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 THAP9Q9H5L6 903 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 RPF1Q9H9Y2 349 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 KIAA1586Q9HCI6 787 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 TBC1D13Q9NVG8 400 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms