RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 MAGEH1Q9H213 219 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 ITM2CQ9NQX7 267 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 SMC4Q9NTJ3 1288 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 RBM12Q9NTZ6 932 aaKnown RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 LRFN1Q9P244 771 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 ARHGAP28Q9P2N2 729 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 HDAC9Q9UKV0 1011 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 CRYL1Q9Y2S2 319 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 PCDHA3Q9Y5H8 950 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 LMTK3Q96Q04 1460 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 SYNJ1O43426 1573 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 GOLGA6L3A6NEY3 463 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 EYA2O00167 538 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 IRAK2O43187 625 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 NRP2O60462 931 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 ARIH2O95376 493 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 MPIG6BO95866 241 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 KRT1P04264 644 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 C1QTNF9P0C862 333 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 ZSCAN22P10073 491 aaPredicted RBP4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 GLI4P10075 376 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 TYRP14679 529 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 XPAP23025 273 aaPredicted RBP4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 PTGS1P23219 599 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 EEF1GP26641 437 aaKnown RBP4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 ARL4CP56559 192 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 CDC42EP1Q00587 391 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 GRM1Q13255 1194 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 POSTNQ15063 836 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 PFKFB4Q16877 469 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 CCDC93Q567U6 631 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 BICRALQ6AI39 1079 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 FAAH2Q6GMR7 532 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 RETSATQ6NUM9 610 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 MZT2BQ6NZ67 158 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 CFAP161Q6P656 301 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 GALNT18Q6P9A2 607 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 GLB1L2Q8IW92 636 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 TXLNBQ8N3L3 684 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 SH2D3CQ8N5H7 860 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 MSL3Q8N5Y2 521 aaKnown RBP4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 ARRDC4Q8NCT1 418 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 SNRNP27Q8WVK2 155 aaKnown RBP4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 ERP27Q96DN0 273 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 PAWRQ96IZ0 340 aaKnown RBP4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 CLPTM1LQ96KA5 538 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 MSLNLQ96KJ4 702 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 HIST1H2AHQ96KK5 128 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 SAMD11Q96NU1 681 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 ALPK1Q96QP1 1244 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 HIST1H2AJQ99878 128 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 STK33Q9BYT3 514 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 UNC45AQ9H3U1 944 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 NSUN3Q9H649 340 aaKnown RBP4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 CNNM1Q9NRU3 951 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 TDP1Q9NUW8 608 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 PNPOQ9NVS9 261 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 DACT1Q9NYF0 836 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 CLIC5Q9NZA1 410 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 CPNE7Q9UBL6 633 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 FTSJ1Q9UET6 329 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 ABCF2Q9UG63 623 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 EBF1Q9UH73 591 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 POLG2Q9UHN1 485 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 FEZ2Q9UHY8 353 aaPredicted RBP4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 CPA4Q9UI42 421 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 WASF3Q9UPY6 502 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 SIT1Q9Y3P8 196 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 AQRO60306 1485 aaKnown RBP eCLIP4.62□□□□□ -1.676e-9■■■■□ 25.9
SFSWAP-211ENST00000542813 TOPBP1Q92547 1522 aa4.62□□□□□ -1.67
SFSWAP-211ENST00000542813 A0A0A6YYJ9 748 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 LGALS16A8MUM7 142 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 ACKR2O00590 384 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 FIBPO43427 364 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 NPR1P16066 1061 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 PRKCAP17252 672 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 SUMO3P55854 103 aaPredicted RBP4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 NRG3P56975 720 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 MPP1Q00013 466 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 POU5F1Q01860 360 aaKnown RBP4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 SEPT2Q15019 361 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 TAF5Q15542 800 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 SLC14A2Q15849 920 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 KHDC1Q4VXA5 237 aaKnown RBP4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 FAM180AQ6UWF9 173 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 COLGALT2Q8IYK4 626 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 ATP11CQ8NB49 1132 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 FANCBQ8NB91 859 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 NGDNQ8NEJ9 315 aaKnown RBP4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 RAB24Q969Q5 203 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 MUL1Q969V5 352 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 DIRC2Q96SL1 478 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 VRK1Q99986 396 aaPredicted RBP4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 BRIP1Q9BX63 1249 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 SORBS1Q9BX66 1292 aaKnown RBP4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 SLC26A6Q9BXS9 759 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 CNTD2Q9H8S5 307 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 EPB41L4AQ9HCS5 686 aaPredicted RBP4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 SARS2Q9NP81 518 aaKnown RBP4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms