RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ANKFY1Q9P2R3 1169 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 NOP56O00567 594 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 CYP1A2P05177 515 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 PROZP22891 400 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 MATR3P43243 847 aaKnown RBP eCLIP15.25■□□□□ 0.03
LDB3-207ENST00000542786 MRPS25P82663 173 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 GABPB1Q06547 395 aaPredicted RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 MXD4Q14582 209 aaPredicted RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 SMC1AQ14683 1233 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 PTPROQ16827 1216 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 WDR78Q5VTH9 848 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 TAF3Q5VWG9 929 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 ANKRD23Q86SG2 305 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 GSPT2Q8IYD1 628 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 ABRAQ8N0Z2 381 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 LRRC71Q8N4P6 559 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 OR5B17Q8NGF7 314 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 TRAPPC12Q8WVT3 735 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 CALR3Q96L12 384 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 SMARCAD1Q9H4L7 1026 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 SEPT11Q9NVA2 429 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 STIM2Q9P246 746 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 TTC7AQ9ULT0 858 aaPredicted RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 TOM1L1O75674 476 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 ADORA2AP29274 412 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 SLC7A5Q01650 507 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 MCL1Q07820 350 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 GRM1Q13255 1194 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 SCARA3Q6AZY7 606 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 ZNF467Q7Z7K2 595 aaPredicted RBP15.24■□□□□ 0.03
LDB3-207ENST00000542786 EXOC8Q8IYI6 725 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 LINC01465Q8N7H1 131 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 UBR7Q8N806 425 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 FAM81BQ96LP2 452 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 MRPL4Q9BYD3 311 aaKnown RBP15.24■□□□□ 0.03
LDB3-207ENST00000542786 VIPAS39Q9H9C1 493 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 PTPRHQ9HD43 1115 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 VTA1Q9NP79 307 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 GDF3Q9NR23 364 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 C1orf112Q9NSG2 853 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 AMFRQ9UKV5 643 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 CNTN6Q9UQ52 1028 aa15.24■□□□□ 0.03
LDB3-207ENST00000542786 CCL15-CCL14A0A0B4J2E2 113 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 HBP1O60381 514 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 C22orf31O95567 290 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 GTF2A2P52657 109 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 GPC5P78333 572 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 CCNA1P78396 465 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 CCL15Q16663 113 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 GJC2Q5T442 439 aaPredicted RBP15.23■□□□□ 0.03
LDB3-207ENST00000542786 CCDC70Q6NSX1 233 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 C8orf74Q6P047 294 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 RNF149Q8NC42 400 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 EMID1Q96A84 441 aaPredicted RBP15.23■□□□□ 0.03
LDB3-207ENST00000542786 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.23■□□□□ 0.03
LDB3-207ENST00000542786 FZD8Q9H461 694 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 NOC2LQ9Y3T9 749 aaKnown RBP15.23■□□□□ 0.03
LDB3-207ENST00000542786 ZSWIM8A7E2V4 1837 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 FAM170AA1A519 330 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 PGRMC1O00264 195 aaKnown RBP15.23■□□□□ 0.03
LDB3-207ENST00000542786 CEP104O60308 925 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 CALCAP01258 141 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 PRKCBP05771 671 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 GLI1P08151 1106 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 TNNI1P19237 187 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 TNFSF9P41273 254 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 PIK3CAP42336 1068 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 GCLCP48506 637 aaPredicted RBP15.23■□□□□ 0.03
LDB3-207ENST00000542786 PDE6CP51160 858 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 FKBP1BP68106 108 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 CLEC16AQ2KHT3 1053 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 MAP9Q49MG5 647 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 SEZ6Q53EL9 994 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 SPOPLQ6IQ16 392 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 ZBTB10Q96DT7 871 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 RNPEPQ9H4A4 650 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 GTF3C4Q9UKN8 822 aa15.23■□□□□ 0.03
LDB3-207ENST00000542786 UMODL1Q5DID0 1318 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 GJB1P08034 283 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 CLTAP09496 248 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 SRGAP2CP0DJJ0 459 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 OAS2P29728 719 aaKnown RBP15.22■□□□□ 0.03
LDB3-207ENST00000542786 CUL2Q13617 745 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 LAMC2Q13753 1193 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 GPR162Q16538 588 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 ALG3Q92685 438 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 CD101Q93033 1021 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 KRT12Q99456 494 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 JPH2Q9BR39 696 aaPredicted RBP15.22■□□□□ 0.03
LDB3-207ENST00000542786 SELENOOQ9BVL4 669 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 C2orf40Q9H1Z8 148 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 ZNF408Q9H9D4 720 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 CPSF3Q9UKF6 684 aaKnown RBP15.22■□□□□ 0.03
LDB3-207ENST00000542786 HPCAL4Q9UM19 191 aa15.22■□□□□ 0.03
LDB3-207ENST00000542786 OGTO15294 1046 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 CLDN3O15551 220 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 SNAI1O95863 264 aaPredicted RBP15.21■□□□□ 0.03
LDB3-207ENST00000542786 LGALS2P05162 132 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms