RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 DDX42Q86XP3 938 aaKnown RBP eCLIP10.84□□□□□ -0.67
TOP3A-208ENST00000542570 CCDC77Q9BR77 488 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 KIAA1586Q9HCI6 787 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 CWC15Q9P013 229 aaKnown RBP10.84□□□□□ -0.67
TOP3A-208ENST00000542570 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-208ENST00000542570 PPP2R3BQ9Y5P8 575 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 MAD1L1Q9Y6D9 718 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 UBE4BO95155 1302 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 COL16A1Q07092 1604 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-208ENST00000542570 RPS6KA5O75582 802 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
TOP3A-208ENST00000542570 EXOC8Q8IYI6 725 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 LRRC1Q9BTT6 524 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 IQCGQ9H095 443 aaKnown RBP10.84□□□□□ -0.67
TOP3A-208ENST00000542570 SIK2Q9H0K1 926 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 OGFRQ9NZT2 677 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 AFG3L2Q9Y4W6 797 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 BNIP3LO60238 219 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 ZNF862O60290 1169 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 ELNP15502 786 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 KRT15P19012 456 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 NME3Q13232 169 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 LBX2Q6XYB7 198 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 ARHGEF19Q8IW93 802 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 FAM76AQ8TAV0 307 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 TEPSINQ96N21 525 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 SENP7Q9BQF6 1050 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 MYH13Q9UKX3 1938 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 MOCS2O96007 188 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-208ENST00000542570 VIMP08670 466 aaKnown RBP10.83□□□□□ -0.68
TOP3A-208ENST00000542570 CYP3A4P08684 503 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 GNAT1P11488 350 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 BASP1P80723 227 aaKnown RBP10.83□□□□□ -0.68
TOP3A-208ENST00000542570 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 SIX6OS1Q8N1H7 587 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 TMEM117Q9H0C3 514 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 STIM2Q9P246 746 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 PHF20L1A8MW92 1017 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 XPOTO43592 962 aaKnown RBP10.83□□□□□ -0.68
TOP3A-208ENST00000542570 ZRANB2O95218 330 aaKnown RBP eCLIP10.83□□□□□ -0.68
TOP3A-208ENST00000542570 IFNAR2P48551 515 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 DHX9Q08211 1270 aaKnown RBP10.83□□□□□ -0.68
TOP3A-208ENST00000542570 TMEM132DQ14C87 1099 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 B4GALNT4Q76KP1 1039 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 RIOX2Q8IUF8 465 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 REPS2Q8NFH8 660 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 MICAL1Q8TDZ2 1067 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 TXNDC16Q9P2K2 825 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 FAM169AQ9Y6X4 670 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 IGLV3-22A0A075B6J6 115 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 PIK3CDO00329 1044 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 ACSL3O95573 720 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 TNFSF9P41273 254 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 GCLCP48506 637 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-208ENST00000542570 BCAR1P56945 870 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 CPLX4Q7Z7G2 160 aa10.83□□□□□ -0.68
TOP3A-208ENST00000542570 ZC3H18Q86VM9 953 aaKnown RBP10.83□□□□□ -0.68
TOP3A-208ENST00000542570 FAM237AA0A1B0GTK4 181 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 A6NJR5 290 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 EIF3DO15371 548 aaKnown RBP eCLIP10.82□□□□□ -0.68
TOP3A-208ENST00000542570 VSNL1P62760 191 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 PPIL2Q13356 520 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 GPAT2Q6NUI2 795 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 XRRA1Q6P2D8 792 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 DNERQ8NFT8 737 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 BEST2Q8NFU1 509 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 CYFIP2Q96F07 1278 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 MRPL47Q9HD33 250 aaKnown RBP10.82□□□□□ -0.68
TOP3A-208ENST00000542570 SNTG2Q9NY99 539 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 C2CD2LO14523 706 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 CREB3O43889 395 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 GHRP10912 638 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 GUCY2CP25092 1073 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 PPM1FP49593 454 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-208ENST00000542570 TLK2Q86UE8 772 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 ATP8B4Q8TF62 1192 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 CELF4Q9BZC1 486 aaKnown RBP10.82□□□□□ -0.68
TOP3A-208ENST00000542570 RNPEPQ9H4A4 650 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 GINM1Q9NU53 330 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 CYP3A7-CYP3A51PA0A087WV96 503 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 CCDC66A2RUB6 948 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 OPLAHO14841 1288 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 TGFB1I1O43294 461 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 EXTL3O43909 919 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 PRPSAP2O60256 369 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 CYP3A7P24462 503 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 TUBB2AQ13885 445 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 KCNT1Q5JUK3 1230 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 DAB2IPQ5VWQ8 1189 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 LRRC55Q6ZSA7 311 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 GPR142Q7Z601 462 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 ACOT1Q86TX2 421 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 KIAA0319LQ8IZA0 1049 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 C1orf131Q8NDD1 294 aaKnown RBP10.82□□□□□ -0.68
TOP3A-208ENST00000542570 SPATA4Q8NEY3 305 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 ZNF507Q8TCN5 953 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 RIN2Q8WYP3 895 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-208ENST00000542570 MTMR8Q96EF0 704 aa10.82□□□□□ -0.68
TOP3A-208ENST00000542570 TINF2Q9BSI4 451 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms