RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CRIPAKQ8N1N5 446 aa25.1■■□□□ 1.61
HOMER3-205ENST00000542541 TOP1MTQ969P6 601 aa25.1■■□□□ 1.61
HOMER3-205ENST00000542541 TSPAN18Q96SJ8 248 aa25.1■■□□□ 1.61
HOMER3-205ENST00000542541 TTC26A0AVF1 554 aa25.09■■□□□ 1.61
HOMER3-205ENST00000542541 ADRB2P07550 413 aa25.09■■□□□ 1.61
HOMER3-205ENST00000542541 ENPEPQ07075 957 aa25.09■■□□□ 1.61
HOMER3-205ENST00000542541 LUZP1Q86V48 1076 aa25.09■■□□□ 1.61
HOMER3-205ENST00000542541 FAM212AQ96EL1 285 aa25.09■■□□□ 1.61
HOMER3-205ENST00000542541 FNBP1Q96RU3 617 aa25.09■■□□□ 1.61
HOMER3-205ENST00000542541 SAMSN1Q9NSI8 373 aaKnown RBP25.09■■□□□ 1.61
HOMER3-205ENST00000542541 SLC4A7Q9Y6M7 1214 aa25.09■■□□□ 1.61
HOMER3-205ENST00000542541 TULP1O00294 542 aaPredicted RBP25.08■■□□□ 1.61
HOMER3-205ENST00000542541 MARSP56192 900 aaKnown RBP25.08■■□□□ 1.61
HOMER3-205ENST00000542541 PSMD6Q15008 389 aa25.08■■□□□ 1.61
HOMER3-205ENST00000542541 CREBRFQ8IUR6 639 aa25.08■■□□□ 1.61
HOMER3-205ENST00000542541 ABI1Q8IZP0 508 aa25.08■■□□□ 1.61
HOMER3-205ENST00000542541 TMC2Q8TDI7 906 aa25.08■■□□□ 1.61
HOMER3-205ENST00000542541 SNX27Q96L92 541 aa25.08■■□□□ 1.61
HOMER3-205ENST00000542541 RPS6KC1Q96S38 1066 aa25.08■■□□□ 1.61
HOMER3-205ENST00000542541 GDF15Q99988 308 aa25.08■■□□□ 1.61
HOMER3-205ENST00000542541 UBE2OQ9C0C9 1292 aaKnown RBP25.08■■□□□ 1.61
HOMER3-205ENST00000542541 MEIS3P2A8K0S8 358 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 LACTBL1A8MY62 500 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 UPP2O95045 317 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 CDK11BP21127 795 aaKnown RBP25.08■■□□□ 1.6
HOMER3-205ENST00000542541 EEF1GP26641 437 aaKnown RBP25.08■■□□□ 1.6
HOMER3-205ENST00000542541 SPAG1Q07617 926 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 ALKAL1Q6UXT8 129 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 IRF2BP1Q8IU81 584 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 ANKRD20A12PQ8NF67 263 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 PHOSPHO2Q8TCD6 241 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 CCDC127Q96BQ5 260 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 CNOT6LQ96LI5 555 aaKnown RBP25.08■■□□□ 1.6
HOMER3-205ENST00000542541 KLK14Q9P0G3 267 aa25.08■■□□□ 1.6
HOMER3-205ENST00000542541 ARL5CA6NH57 179 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 VAMP7P51809 220 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 DEFB103AP81534 67 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 BFSP1Q12934 665 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 XKR4Q5GH76 650 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 CDKAL1Q5VV42 579 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 NT5DC4Q86YG4 428 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 PARD3BQ8TEW8 1205 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 BORCS6Q96GS4 357 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 SLC9A7Q96T83 725 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 GAD1Q99259 594 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 PDE11AQ9HCR9 933 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 CNTN3Q9P232 1028 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 KANSL3Q9P2N6 904 aa25.07■■□□□ 1.6
HOMER3-205ENST00000542541 OFD1O75665 1012 aa25.06■■□□□ 1.6
HOMER3-205ENST00000542541 MLH1P40692 756 aa25.06■■□□□ 1.6
HOMER3-205ENST00000542541 RNF214Q8ND24 703 aa25.06■■□□□ 1.6
HOMER3-205ENST00000542541 URGCPQ8TCY9 931 aa25.06■■□□□ 1.6
HOMER3-205ENST00000542541 CXXC1Q9P0U4 656 aaPredicted RBP25.06■■□□□ 1.6
HOMER3-205ENST00000542541 DERAQ9Y315 318 aa25.06■■□□□ 1.6
HOMER3-205ENST00000542541 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.06■■□□□ 1.6
HOMER3-205ENST00000542541 TTC3P53804 2025 aa25.06■■□□□ 1.6
HOMER3-205ENST00000542541 KCNJ18B7U540 433 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 INPPL1O15357 1258 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 DLATP10515 647 aaKnown RBP25.05■■□□□ 1.6
HOMER3-205ENST00000542541 FGFR1P11362 822 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 KCNE1P15382 129 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 MCCD1P59942 119 aaPredicted RBP25.05■■□□□ 1.6
HOMER3-205ENST00000542541 KCNJ12Q14500 433 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 HSP90AA4PQ58FG1 418 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 TCP11X2Q5H9J9 407 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 RASIP1Q5U651 963 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 ZFP42Q96MM3 310 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 TMEM117Q9H0C3 514 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 C2CD2Q9Y426 696 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 MICAL3Q7RTP6 2002 aa25.05■■□□□ 1.6
HOMER3-205ENST00000542541 SMIM28A0A1B0GU29 152 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 STX10O60499 249 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 ZNF18P17022 549 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 TNNI1P19237 187 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 MTIF2P46199 727 aaKnown RBP25.04■■□□□ 1.6
HOMER3-205ENST00000542541 NOMO2Q5JPE7 1267 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 CLLU1OSQ5K130 101 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 HELQQ8TDG4 1101 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 CACTINQ8WUQ7 758 aaKnown RBP25.04■■□□□ 1.6
HOMER3-205ENST00000542541 RNPC3Q96LT9 517 aaKnown RBP25.04■■□□□ 1.6
HOMER3-205ENST00000542541 MEFVO15553 781 aaPredicted RBP25.04■■□□□ 1.6
HOMER3-205ENST00000542541 XPOTO43592 962 aaKnown RBP25.04■■□□□ 1.6
HOMER3-205ENST00000542541 DGKIO75912 1065 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 AP3M2P53677 418 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 SHHQ15465 462 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 TCERG1LQ5VWI1 586 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 GAS2L3Q86XJ1 694 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 WDR49Q8IV35 697 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 TRIM59Q8IWR1 403 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 CGRRF1Q99675 332 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 HSD3B7Q9H2F3 369 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 SLC38A7Q9NVC3 462 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 INPP5FQ9Y2H2 1132 aa25.04■■□□□ 1.6
HOMER3-205ENST00000542541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.04■■□□□ 1.6
HOMER3-205ENST00000542541 THP07101 528 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 TPM2P07951 284 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 ATP2A2P16615 1042 aaKnown RBP25.03■■□□□ 1.6
HOMER3-205ENST00000542541 BMP8BP34820 402 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 CLDN10P78369 228 aa25.03■■□□□ 1.6
HOMER3-205ENST00000542541 TMEM132DQ14C87 1099 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms