RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 ADAMTS1Q9UHI8 967 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 COQ4Q9Y3A0 265 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 PAXBP1Q9Y5B6 917 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 PCDHA13Q9Y5I0 950 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 CNTNAP2Q9UHC6 1331 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 MBLAC1A4D2B0 266 aaPredicted RBP11.91□□□□□ -0.5
SCG3-202ENST00000542355 SEPT4O43236 478 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 TREHO43280 583 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 RARBP10826 455 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 CYP2C9P11712 490 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 SOX5P35711 763 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 MAP2K2P36507 400 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 GJA9P57773 515 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 OSTNP61366 133 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 PTK2Q05397 1052 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 FAM187BQ17R55 369 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 PBXIP1Q96AQ6 731 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 CPB2Q96IY4 423 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 GPR88Q9GZN0 384 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 GUCA1BQ9UMX6 200 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 TNFSF13BQ9Y275 285 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 BZW2Q9Y6E2 419 aaKnown RBP11.91□□□□□ -0.5
SCG3-202ENST00000542355 PTPRJQ12913 1337 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 RCCD1A6NED2 376 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 FOXN3O00409 490 aaPredicted RBP11.91□□□□□ -0.5
SCG3-202ENST00000542355 KIF5CO60282 957 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 EVI5O60447 810 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 C4BPAP04003 597 aaKnown RBP11.91□□□□□ -0.5
SCG3-202ENST00000542355 RFX1P22670 979 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 CCDC122Q5T0U0 273 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 ZNF571Q7Z3V5 609 aaPredicted RBP11.91□□□□□ -0.5
SCG3-202ENST00000542355 PPM1KQ8N3J5 372 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 C7orf31Q8N865 590 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 CEP120Q8N960 986 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 DNAJB3Q8WWF6 145 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 WDR24Q96S15 920 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 PI4K2AQ9BTU6 479 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 CFHR5Q9BXR6 569 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 IFIH1Q9BYX4 1025 aaKnown RBP11.91□□□□□ -0.5
SCG3-202ENST00000542355 LACRTQ9GZZ8 138 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 SPC25Q9HBM1 224 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 SRRDQ9UH36 339 aa11.91□□□□□ -0.5
SCG3-202ENST00000542355 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
SCG3-202ENST00000542355 A0A087X0T9 212 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 SMIM35A0A1B0GVV1 85 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 FANCGO15287 622 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 LCA5LO95447 670 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 FAM228BP0C875 321 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
SCG3-202ENST00000542355 FERP16591 822 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 ARF4P18085 180 aaPredicted RBP11.9□□□□□ -0.5
SCG3-202ENST00000542355 FGFR4P22455 802 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 HOXD10P28358 340 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 CCND3P30281 292 aaPredicted RBP11.9□□□□□ -0.5
SCG3-202ENST00000542355 MAGEA1P43355 309 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 ADAM17P78536 824 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 BIRC3Q13489 604 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 TDRD10Q5VZ19 366 aaKnown RBP11.9□□□□□ -0.5
SCG3-202ENST00000542355 CXCL17Q6UXB2 119 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 ZNF410Q86VK4 478 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 BRSK2Q8IWQ3 736 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 KAT5Q92993 513 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 JAKMIP2Q96AA8 810 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 PRIMPOLQ96LW4 560 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 CDT1Q9H211 546 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 ADAMTS10Q9H324 1103 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 DAAM1Q9Y4D1 1078 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 DUSP10Q9Y6W6 482 aa11.9□□□□□ -0.5
SCG3-202ENST00000542355 C17orf102A2RUQ5 167 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 GPR25O00155 361 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 KPNA6O60684 536 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 GPR32O75388 356 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 ERLIN2O94905 339 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 PRKCIP41743 596 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 VAV2P52735 878 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 SLC18A3Q16572 532 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 ZACNQ401N2 412 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 ZNF569Q5MCW4 686 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 SRGAP1Q7Z6B7 1085 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 OR5B17Q8NGF7 314 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 TATDN2Q93075 761 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 NT5C1BQ96P26 610 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 OSMRQ99650 979 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 REPIN1Q9BWE0 567 aaKnown RBP11.89□□□□□ -0.51
SCG3-202ENST00000542355 GCOM2Q9BZD3 368 aaPredicted RBP11.89□□□□□ -0.51
SCG3-202ENST00000542355 ZSWIM8A7E2V4 1837 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 KRT86O43790 486 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 TSPAN1O60635 241 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 GNAT1P11488 350 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 CASQ1P31415 396 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 USP8P40818 1118 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 CDC42EP1Q00587 391 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 KIF5AQ12840 1032 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 TMEM192Q8IY95 271 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 267 ms