RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	MAP7D3	Q8IWC1	876 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	MAGOHB	Q96A72	148 aa	Known RBP	13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	PDE11A	Q9HCR9	933 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	UBQLN1	Q9UMX0	589 aa	Known RBP	13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	FARP2	O94887	1054 aa	Predicted RBP	13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	MXRA7	P84157	204 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	MAP3K10	Q02779	954 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	SLAIN1	Q8ND83	568 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	SNX9	Q9Y5X1	595 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	ZBTB39	O15060	712 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	CSPG5	O95196	566 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	LYPLA2	O95372	231 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	HLA-DRA	P01903	254 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	KAZN	Q674X7	775 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	C1orf186	Q6ZWK4	172 aa		13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	PDZD4	Q76G19	769 aa	Predicted RBP	13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	UHMK1	Q8TAS1	419 aa	Known RBP	13.22	□□□□□ -0.29
ABCB8-222	ENST00000542328	ELN	P15502	786 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	KRT15	P19012	456 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	MICALL1	Q8N3F8	863 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	PPTC7	Q8NI37	304 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	RSAD2	Q8WXG1	361 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	HAUS2	Q9NVX0	235 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	ADAM22	Q9P0K1	906 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	APEX2	Q9UBZ4	518 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	SCIN	Q9Y6U3	715 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	TADA2A	O75478	443 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	SEC31A	O94979	1220 aa	Known RBP	13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	GNA15	P30679	374 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	TTI2	Q6NXR4	508 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	TRIM72	Q6ZMU5	477 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	C4orf32	Q8N8J7	132 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	ZNF507	Q8TCN5	953 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	RNF139	Q8WU17	664 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	ZNF148	Q9UQR1	794 aa		13.21	□□□□□ -0.29
ABCB8-222	ENST00000542328	WNK3	Q9BYP7	1800 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	USP27X	A6NNY8	438 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	HOXA2	O43364	376 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	PQBP1	O60828	265 aa	Known RBP	13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	PPP2R5D	Q14738	602 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	PLCB4	Q15147	1175 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	CASC4	Q6P4E1	433 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	ZPBP2	Q6X784	338 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	SCN4B	Q8IWT1	228 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	CBWD1	Q9BRT8	395 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	ZMYND15	Q9H091	742 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	VPS37B	Q9H9H4	285 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	VAV3	Q9UKW4	847 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	TTLL3	Q9Y4R7	772 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	PCDHB7	Q9Y5E2	793 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	TAF1	P21675	1872 aa		13.21	□□□□□ -0.3
ABCB8-222	ENST00000542328	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	AOC2	O75106	756 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	CD44	P16070	742 aa	Known RBP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SOX5	P35711	763 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	PTGIS	Q16647	500 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	C6orf163	Q5TEZ5	329 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SAPCD2	Q86UD0	394 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	COX16	Q9P0S2	106 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SSX2IP	Q9Y2D8	614 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	TRPV2	Q9Y5S1	764 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	TLL2	Q9Y6L7	1015 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	PABPN1L	A6NDY0	278 aa	Known RBP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328		A6NJR5	290 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	PGRMC1	O00264	195 aa	Known RBP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	ACKR2	O00590	384 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	WNT7A	O00755	349 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	HEXIM1	O94992	359 aa	Known RBP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	BSPRY	Q5W0U4	402 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SH3RF1	Q7Z6J0	888 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	PHLDB2	Q86SQ0	1253 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	RHOT2	Q8IXI1	618 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	CAPN11	Q9UMQ6	739 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	DDX60	Q8IY21	1712 aa	Known RBP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328		A6NNZ2	444 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	DUSP11	O75319	330 aa	Known RBP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	GNRH1	P01148	92 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SLC10A3	P09131	477 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	MAP2K2	P36507	400 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	TUBB8	Q3ZCM7	444 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SV2C	Q496J9	727 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SGO2	Q562F6	1265 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	PDXDC1	Q6P996	788 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	ABHD15	Q6UXT9	468 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	TAOK1	Q7L7X3	1001 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	CBWD2	Q8IUF1	395 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	APPL2	Q8NEU8	664 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	GCNA	Q96QF7	691 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	STK33	Q9BYT3	514 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	EPB41L5	Q9HCM4	733 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SLC12A6	Q9UHW9	1150 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	UBR3	Q6ZT12	1888 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	RGS16	O15492	202 aa	Predicted RBP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	RAG1	P15918	1043 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	KCNA2	P16389	499 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	AXL	P30530	894 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	PNPLA4	P41247	253 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	MNAT1	P51948	309 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	IL17A	Q16552	155 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms