RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 GRM5P41594 1212 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 TDGQ13569 410 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 LIN9Q5TKA1 542 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
VTN-203ENST00000542029 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.51□□□□□ -0.41
VTN-203ENST00000542029 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
VTN-203ENST00000542029 ACO2Q99798 780 aaKnown RBP12.51□□□□□ -0.41
VTN-203ENST00000542029 TCHPQ9BT92 498 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 MMTAG2Q9BU76 263 aaKnown RBP12.51□□□□□ -0.41
VTN-203ENST00000542029 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
VTN-203ENST00000542029 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.51□□□□□ -0.41
VTN-203ENST00000542029 C5orf42Q9H799 3197 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 PP2D1A8MPX8 630 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 ZMYND10O75800 440 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 B3GAT3O94766 335 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 KIF4AO95239 1232 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 HNRNPA1P09651 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
VTN-203ENST00000542029 MCF2P10911 925 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 CDC25AP30304 524 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 STRN3Q13033 797 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
VTN-203ENST00000542029 NAB2Q15742 525 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 PSMD5Q16401 504 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 IL17AQ16552 155 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 UVSSAQ2YD98 709 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 ZNF568Q3ZCX4 644 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 RTP2Q5QGT7 225 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 CEP57Q86XR8 500 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 DAW1Q8N136 415 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 LNX1Q8TBB1 728 aaPredicted RBP12.5□□□□□ -0.41
VTN-203ENST00000542029 B3GALT6Q96L58 329 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
VTN-203ENST00000542029 PAAF1Q9BRP4 392 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 RUSC1Q9BVN2 902 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 PRKD2Q9BZL6 878 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 POLD4Q9HCU8 107 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 PTPRHQ9HD43 1115 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 LARSQ9P2J5 1176 aaKnown RBP12.5□□□□□ -0.41
VTN-203ENST00000542029 EPS15L1Q9UBC2 864 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 ZFP37Q9Y6Q3 630 aaPredicted RBP12.5□□□□□ -0.41
VTN-203ENST00000542029 CLUHO75153 1309 aa12.5□□□□□ -0.41
VTN-203ENST00000542029 CACNA1HO95180 2353 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 SMIM28A0A1B0GU29 152 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 VWA3AA6NCI4 1184 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 TOM1L1O75674 476 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 RFPL2O75678 378 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 EDN1P05305 212 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 POU2F2P09086 479 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 PLS3P13797 630 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 HOXA9P31269 272 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 GBP2P32456 591 aaPredicted RBP12.49□□□□□ -0.41
VTN-203ENST00000542029 UBA7P41226 1012 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 MAPK7Q13164 816 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 XKR4Q5GH76 650 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 PRSS55Q6UWB4 352 aaPredicted RBP12.49□□□□□ -0.41
VTN-203ENST00000542029 MPZL3Q6UWV2 235 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 ANKS3Q6ZW76 656 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 RABGGTAQ92696 567 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 ZNF707Q96C28 371 aaPredicted RBP12.49□□□□□ -0.41
VTN-203ENST00000542029 CALML4Q96GE6 196 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
VTN-203ENST00000542029 CDT1Q9H211 546 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 MFSD1Q9H3U5 465 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 KCNK12Q9HB15 430 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 FBXW11Q9UKB1 542 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 DUSP12Q9UNI6 340 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 ZNF318Q5VUA4 2279 aa12.49□□□□□ -0.41
VTN-203ENST00000542029 SLC16A4O15374 487 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 XYLBO75191 536 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 PLA2G4BP0C869 781 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 SPATA31D3P0C874 917 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 KCNE1P15382 129 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 RPL17P18621 184 aaKnown RBP12.48□□□□□ -0.41
VTN-203ENST00000542029 PDCP20941 246 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 FGFR3P22607 806 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 PROZP22891 400 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 RPL9P32969 192 aaKnown RBP12.48□□□□□ -0.41
VTN-203ENST00000542029 ABCD1P33897 745 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 CLCN5P51795 746 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 RAB33AQ14088 237 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 UPP1Q16831 310 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 GLRA4Q5JXX5 417 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 IER5LQ5T953 404 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 ALKAL1Q6UXT8 129 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 SPATA31D4Q6ZUB0 917 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 KCNK18Q7Z418 384 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 ALYREFQ86V81 257 aaKnown RBP12.48□□□□□ -0.41
VTN-203ENST00000542029 GLYCTKQ8IVS8 523 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 KCNN1Q92952 543 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 CLSTN3Q9BQT9 956 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 ODF2LQ9ULJ1 636 aa12.48□□□□□ -0.41
VTN-203ENST00000542029 BACE2Q9Y5Z0 518 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms