RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 FAM160B2Q86V87 743 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 CCDC25Q86WR0 208 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 RMDN3Q96TC7 470 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 PTPN22Q9Y2R2 807 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 MRPL11Q9Y3B7 192 aaKnown RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 USP15Q9Y4E8 981 aaPredicted RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 COL2A1P02458 1487 aaPredicted RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 CCDC169A6NNP5 214 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 CLIC2O15247 247 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 ZBED4O75132 1171 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 PLA2G4BP0C869 781 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 CYP11B2P19099 503 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 DSG3P32926 999 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 PTGIRP43119 386 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 KCNJ1P48048 391 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 IREB2P48200 963 aaKnown RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 JAM2P57087 298 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 COPS2P61201 443 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 SARNPP82979 210 aaKnown RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 MAPK7Q13164 816 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 IFI16Q16666 785 aaKnown RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 VSTM1Q6UX27 236 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 CATSPER3Q86XQ3 398 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 ETNPPLQ8TBG4 499 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 CRYGNQ8WXF5 182 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 LPAR1Q92633 364 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 RAB17Q9H0T7 212 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 THAP2Q9H0W7 228 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 AS3MTQ9HBK9 375 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 GCNT4Q9P109 453 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 PFASO15067 1338 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 IGLV3-22A0A075B6J6 115 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 TMEM120BA0PK00 339 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 SPDYE5A6NIY4 337 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 TMEM110-MUSTN1A8MSY1 372 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 RSPH10B2B2RC85 870 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 RIPK2O43353 540 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 AFPP02771 609 aaKnown RBP9.78□□□□□ -0.84
THBS3-211ENST00000541990 RSPH10BP0C881 870 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 SREBF1P36956 1147 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 PRKCIP41743 596 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 PPATQ06203 517 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 PRELID2Q8N945 189 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 DYDC1Q8WWB3 177 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 CCDC134Q9H6E4 229 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 PIDD1Q9HB75 910 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 ARHGEF3Q9NR81 526 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 ASTN1O14525 1302 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 CETN3O15182 167 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 GRIN3BO60391 1043 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 ACSL3O95573 720 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 AGTP01019 485 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 GM2AP17900 193 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 BLMHQ13867 455 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 C10orf76Q5T2E6 689 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 USP50Q70EL3 339 aaPredicted RBP9.78□□□□□ -0.84
THBS3-211ENST00000541990 ASRGL1Q7L266 308 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 SLC10A4Q96EP9 437 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 SAAL1Q96ER3 474 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 TMEM237Q96Q45 408 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 OSBPL1AQ9BXW6 950 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 ASCC2Q9H1I8 757 aaPredicted RBP9.78□□□□□ -0.84
THBS3-211ENST00000541990 BATF3Q9NR55 127 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 ARMCX3Q9UH62 379 aaPredicted RBP9.78□□□□□ -0.84
THBS3-211ENST00000541990 PCDHA3Q9Y5H8 950 aa9.78□□□□□ -0.84
THBS3-211ENST00000541990 RASGRF2O14827 1237 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 ATP2A2P16615 1042 aaKnown RBP9.77□□□□□ -0.84
THBS3-211ENST00000541990 CCND1P24385 295 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 SOX10P56693 466 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 SPIRE1Q08AE8 756 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 TAF11Q15544 211 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 TNFAIP8L3Q5GJ75 292 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 ARHGEF16Q5VV41 709 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 ZC3H3Q8IXZ2 948 aaKnown RBP9.77□□□□□ -0.84
THBS3-211ENST00000541990 CCHCR1Q8TD31 782 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 DYDC2Q96IM9 177 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 PWWP2AQ96N64 755 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 ZIC5Q96T25 663 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 LBHD1Q9BQE6 289 aaPredicted RBP9.77□□□□□ -0.84
THBS3-211ENST00000541990 ZNF577Q9BSK1 485 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 KCNH7Q9NS40 1196 aa9.77□□□□□ -0.84
THBS3-211ENST00000541990 SPATS2LQ9NUQ6 558 aaKnown RBP9.77□□□□□ -0.84
THBS3-211ENST00000541990 SEPT11Q9NVA2 429 aaKnown RBP9.77□□□□□ -0.84
THBS3-211ENST00000541990 DPPA5A6NC42 116 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 hCG_1984214I3L0E3 225 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 KIF3CO14782 793 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 GNA14O95837 355 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 PDHA1P08559 390 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 PDE6CP51160 858 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 CEP55Q53EZ4 464 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 CST9Q5W186 159 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 PPP1R18Q6NYC8 613 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 SFR1Q86XK3 245 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 ZNF713Q8N859 430 aaPredicted RBP9.77□□□□□ -0.85
THBS3-211ENST00000541990 REPS2Q8NFH8 660 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 SLC30A5Q8TAD4 765 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 SLC35C1Q96A29 364 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 PORCNQ9H237 461 aa9.77□□□□□ -0.85
THBS3-211ENST00000541990 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms