RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 DUOXA2Q1HG44 320 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 STMN3Q9NZ72 180 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 LGALS16A8MUM7 142 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 FDX1P10109 184 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 RUNX1T1Q06455 604 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 TBL3Q12788 808 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 STN1Q9H668 368 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 KRCC1Q9NPI7 259 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 CD274Q9NZQ7 290 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 AGO2Q9UKV8 859 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 PRG3Q9Y2Y8 225 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 PRRG1O14668 218 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 ADCY3O60266 1144 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 TOMM70O94826 608 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 BRD2P25440 801 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 EIF3EP60228 445 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 IL31Q6EBC2 164 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 TRIM48Q8IWZ4 208 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 NUP93Q8N1F7 819 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 FKBP9O95302 570 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 FTLP02792 175 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 CLCN6P51797 869 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 FKBP9P1Q75LS8 142 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 TNIP2Q8NFZ5 429 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 OSBP2Q969R2 916 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 SAAL1Q96ER3 474 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 KDM5DQ9BY66 1539 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 PVALEFA0A1B0GWK0 134 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 PFASO15067 1338 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 CACNB3P54284 484 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 RASGRF1Q13972 1273 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 DRAP1Q14919 205 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 STILQ15468 1287 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 ARHGAP15Q53QZ3 475 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 CEP78Q5JTW2 689 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 ZNF668Q96K58 619 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 LATS2Q9NRM7 1088 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 TMEM2Q9UHN6 1383 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 IQCA1LA6NCM1 817 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 PYGMP11217 842 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 MLNP12872 115 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 ZNF211Q13398 564 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 PROSER3Q2NL68 480 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 ANKS6Q68DC2 871 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 CLEC4FQ8N1N0 589 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 ABHD10Q9NUJ1 306 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 BLOC1S6Q9UL45 172 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 ANO9A1A5B4 782 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 APOA4P06727 396 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 RGS4P49798 205 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 C6orf10Q5SRN2 563 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 LXNQ9BS40 222 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 GEMIN8Q9NWZ8 242 aaKnown RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 KCNN4O15554 427 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 PRKCBP05771 671 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 HMBSP08397 361 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 ARSEP51690 589 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 PKP1Q13835 747 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 HIST2H2ACQ16777 129 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 UGP2Q16851 508 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 HIST2H2AA3Q6FI13 130 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 C17orf80Q9BSJ5 609 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 MLXIPLQ9NP71 852 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 HDAC6Q9UBN7 1215 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 FAM47E-STBD1D6RA91 191 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 STXBP3O00186 592 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 CYTH3O43739 400 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 ALDH18A1P54886 795 aaKnown RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 NCKAP1LP55160 1127 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 MED15Q96RN5 788 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 NSMCE4AQ9NXX6 385 aa11.3□□□□□ -0.6
GABRB3-204ENST00000541819 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.3□□□□□ -0.6
GABRB3-204ENST00000541819 KIAA0391O15091 583 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 CCDC137Q6PK04 289 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 PI16Q6UXB8 463 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 DIS3LQ8TF46 1054 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 GFM2Q969S9 779 aaKnown RBP11.29□□□□□ -0.6
GABRB3-204ENST00000541819 PPP1R36Q96LQ0 422 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 USE1Q9NZ43 259 aa11.29□□□□□ -0.6
GABRB3-204ENST00000541819 KDM5AP29375 1690 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms